Protein–RNA interactions for Protein: Q9CQJ1

Higd2a, HIG1 domain family member 2A, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Higd2aQ9CQJ1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Higd2aQ9CQJ1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Higd2aQ9CQJ1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Gm43173-201ENSMUST00000202246 593 ntBASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Higd2aQ9CQJ1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Higd2aQ9CQJ1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Higd2aQ9CQJ1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Higd2aQ9CQJ1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Higd2aQ9CQJ1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Higd2aQ9CQJ1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Higd2aQ9CQJ1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Higd2aQ9CQJ1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Higd2aQ9CQJ1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.03□□□□□ -0.16
Higd2aQ9CQJ1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Higd2aQ9CQJ1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.03□□□□□ -0.16
Higd2aQ9CQJ1 Gm26833-201ENSMUST00000180899 440 ntBASIC14.03□□□□□ -0.16
Higd2aQ9CQJ1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms