Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh15Q99PJ1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh15Q99PJ1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh15Q99PJ1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.91■■□□□ 1.26
Pcdh15Q99PJ1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdh15Q99PJ1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdh15Q99PJ1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.91■■□□□ 1.26
Pcdh15Q99PJ1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdh15Q99PJ1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.91■■□□□ 1.26
Pcdh15Q99PJ1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.9■■□□□ 1.26
Pcdh15Q99PJ1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Pcdh15Q99PJ1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdh15Q99PJ1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdh15Q99PJ1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdh15Q99PJ1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdh15Q99PJ1 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.9■■□□□ 1.26
Pcdh15Q99PJ1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdh15Q99PJ1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdh15Q99PJ1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdh15Q99PJ1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdh15Q99PJ1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdh15Q99PJ1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdh15Q99PJ1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdh15Q99PJ1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdh15Q99PJ1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.89■■□□□ 1.25
Pcdh15Q99PJ1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdh15Q99PJ1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.88■■□□□ 1.25
Pcdh15Q99PJ1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.88■■□□□ 1.25
Pcdh15Q99PJ1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdh15Q99PJ1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdh15Q99PJ1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC22.88■■□□□ 1.25
Pcdh15Q99PJ1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdh15Q99PJ1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Pcdh15Q99PJ1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdh15Q99PJ1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdh15Q99PJ1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdh15Q99PJ1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdh15Q99PJ1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdh15Q99PJ1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.86■■□□□ 1.25
Pcdh15Q99PJ1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Pcdh15Q99PJ1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh15Q99PJ1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh15Q99PJ1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh15Q99PJ1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.86■■□□□ 1.25
Pcdh15Q99PJ1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.86■■□□□ 1.25
Pcdh15Q99PJ1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Pcdh15Q99PJ1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh15Q99PJ1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh15Q99PJ1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh15Q99PJ1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Pcdh15Q99PJ1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.85■■□□□ 1.25
Pcdh15Q99PJ1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Pcdh15Q99PJ1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh15Q99PJ1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh15Q99PJ1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh15Q99PJ1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh15Q99PJ1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh15Q99PJ1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh15Q99PJ1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh15Q99PJ1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.83■■□□□ 1.25
Pcdh15Q99PJ1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.83■■□□□ 1.25
Pcdh15Q99PJ1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh15Q99PJ1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh15Q99PJ1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh15Q99PJ1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdh15Q99PJ1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Pcdh15Q99PJ1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh15Q99PJ1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh15Q99PJ1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh15Q99PJ1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh15Q99PJ1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Pcdh15Q99PJ1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh15Q99PJ1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh15Q99PJ1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.82■■□□□ 1.24
Pcdh15Q99PJ1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC22.82■■□□□ 1.24
Pcdh15Q99PJ1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh15Q99PJ1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh15Q99PJ1 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.81■■□□□ 1.24
Pcdh15Q99PJ1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh15Q99PJ1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh15Q99PJ1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh15Q99PJ1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh15Q99PJ1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh15Q99PJ1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh15Q99PJ1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh15Q99PJ1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh15Q99PJ1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms