Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf111Q99ML9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf111Q99ML9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf111Q99ML9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf111Q99ML9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf111Q99ML9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rnf111Q99ML9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.1■□□□□ 0.65
Rnf111Q99ML9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf111Q99ML9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Rnf111Q99ML9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf111Q99ML9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf111Q99ML9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.09■□□□□ 0.65
Rnf111Q99ML9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf111Q99ML9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rnf111Q99ML9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf111Q99ML9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf111Q99ML9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf111Q99ML9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf111Q99ML9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf111Q99ML9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.08■□□□□ 0.64
Rnf111Q99ML9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Rnf111Q99ML9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.08■□□□□ 0.64
Rnf111Q99ML9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf111Q99ML9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf111Q99ML9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf111Q99ML9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf111Q99ML9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf111Q99ML9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf111Q99ML9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf111Q99ML9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf111Q99ML9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf111Q99ML9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf111Q99ML9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
Rnf111Q99ML9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf111Q99ML9 Gm9870-201ENSMUST00000063874 645 ntBASIC19.05■□□□□ 0.64
Rnf111Q99ML9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf111Q99ML9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Rnf111Q99ML9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf111Q99ML9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf111Q99ML9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rnf111Q99ML9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf111Q99ML9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.04■□□□□ 0.64
Rnf111Q99ML9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf111Q99ML9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rnf111Q99ML9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf111Q99ML9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf111Q99ML9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf111Q99ML9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf111Q99ML9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf111Q99ML9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf111Q99ML9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf111Q99ML9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.03■□□□□ 0.64
Rnf111Q99ML9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf111Q99ML9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf111Q99ML9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf111Q99ML9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf111Q99ML9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf111Q99ML9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf111Q99ML9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.02■□□□□ 0.64
Rnf111Q99ML9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf111Q99ML9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf111Q99ML9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf111Q99ML9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf111Q99ML9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf111Q99ML9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf111Q99ML9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf111Q99ML9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf111Q99ML9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf111Q99ML9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf111Q99ML9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf111Q99ML9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rnf111Q99ML9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Rnf111Q99ML9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.01■□□□□ 0.63
Rnf111Q99ML9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf111Q99ML9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.01■□□□□ 0.63
Rnf111Q99ML9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf111Q99ML9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rnf111Q99ML9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms