Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd2Q99JR8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd2Q99JR8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd2Q99JR8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd2Q99JR8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd2Q99JR8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd2Q99JR8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.02■□□□□ 0.8
Smarcd2Q99JR8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.02■□□□□ 0.8
Smarcd2Q99JR8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd2Q99JR8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd2Q99JR8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd2Q99JR8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd2Q99JR8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd2Q99JR8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smarcd2Q99JR8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Smarcd2Q99JR8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcd2Q99JR8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcd2Q99JR8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Smarcd2Q99JR8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd2Q99JR8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Smarcd2Q99JR8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd2Q99JR8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd2Q99JR8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd2Q99JR8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Mir5133-201ENSMUST00000174955 77 ntBASIC20■□□□□ 0.79
Smarcd2Q99JR8 Gm42555-201ENSMUST00000199304 1039 ntBASIC20■□□□□ 0.79
Smarcd2Q99JR8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20■□□□□ 0.79
Smarcd2Q99JR8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20■□□□□ 0.79
Smarcd2Q99JR8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd2Q99JR8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd2Q99JR8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd2Q99JR8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd2Q99JR8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.99■□□□□ 0.79
Smarcd2Q99JR8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.99■□□□□ 0.79
Smarcd2Q99JR8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd2Q99JR8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd2Q99JR8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Smarcd2Q99JR8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.98■□□□□ 0.79
Smarcd2Q99JR8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd2Q99JR8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd2Q99JR8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.98■□□□□ 0.79
Smarcd2Q99JR8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Smarcd2Q99JR8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.98■□□□□ 0.79
Smarcd2Q99JR8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd2Q99JR8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd2Q99JR8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd2Q99JR8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd2Q99JR8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd2Q99JR8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Smarcd2Q99JR8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Smarcd2Q99JR8 Gm13146-201ENSMUST00000118508 780 ntBASIC19.95■□□□□ 0.78
Smarcd2Q99JR8 Gm12441-201ENSMUST00000121806 588 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms