Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb4Q91XZ6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb4Q91XZ6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb4Q91XZ6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb4Q91XZ6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
Pcdhb4Q91XZ6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcdhb4Q91XZ6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb4Q91XZ6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb4Q91XZ6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb4Q91XZ6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb4Q91XZ6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb4Q91XZ6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhb4Q91XZ6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb4Q91XZ6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
Pcdhb4Q91XZ6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb4Q91XZ6 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.52■□□□□ 0.72
Pcdhb4Q91XZ6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb4Q91XZ6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb4Q91XZ6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdhb4Q91XZ6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhb4Q91XZ6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdhb4Q91XZ6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 Gm22238-201ENSMUST00000175222 88 ntBASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 Gm43530-201ENSMUST00000195920 274 ntBASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb4Q91XZ6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 Gm45102-201ENSMUST00000207427 857 ntBASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb4Q91XZ6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Gm14117-201ENSMUST00000122417 843 ntBASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb4Q91XZ6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb4Q91XZ6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb4Q91XZ6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.48■□□□□ 0.71
Pcdhb4Q91XZ6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb4Q91XZ6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb4Q91XZ6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb4Q91XZ6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhb4Q91XZ6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb4Q91XZ6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb4Q91XZ6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb4Q91XZ6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb4Q91XZ6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb4Q91XZ6 Rps24-207ENSMUST00000224568 714 ntBASIC19.47■□□□□ 0.71
Pcdhb4Q91XZ6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb4Q91XZ6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb4Q91XZ6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb4Q91XZ6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb4Q91XZ6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb4Q91XZ6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhb4Q91XZ6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhb4Q91XZ6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb4Q91XZ6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms