Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tram1Q91V04 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Tram1Q91V04 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tram1Q91V04 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tram1Q91V04 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tram1Q91V04 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.93■□□□□ 0.3
Tram1Q91V04 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tram1Q91V04 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tram1Q91V04 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tram1Q91V04 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Tram1Q91V04 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Tram1Q91V04 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tram1Q91V04 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.92■□□□□ 0.3
Tram1Q91V04 Gm14523-201ENSMUST00000117260 558 ntBASIC16.92■□□□□ 0.3
Tram1Q91V04 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tram1Q91V04 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tram1Q91V04 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tram1Q91V04 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tram1Q91V04 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tram1Q91V04 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tram1Q91V04 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Tram1Q91V04 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tram1Q91V04 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Tram1Q91V04 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tram1Q91V04 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tram1Q91V04 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tram1Q91V04 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.9■□□□□ 0.3
Tram1Q91V04 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tram1Q91V04 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tram1Q91V04 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tram1Q91V04 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tram1Q91V04 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tram1Q91V04 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tram1Q91V04 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tram1Q91V04 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tram1Q91V04 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tram1Q91V04 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tram1Q91V04 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tram1Q91V04 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Tram1Q91V04 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tram1Q91V04 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tram1Q91V04 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tram1Q91V04 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tram1Q91V04 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tram1Q91V04 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Tram1Q91V04 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tram1Q91V04 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Tram1Q91V04 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tram1Q91V04 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Tram1Q91V04 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tram1Q91V04 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tram1Q91V04 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tram1Q91V04 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.88■□□□□ 0.29
Tram1Q91V04 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tram1Q91V04 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.88■□□□□ 0.29
Tram1Q91V04 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tram1Q91V04 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tram1Q91V04 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tram1Q91V04 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tram1Q91V04 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tram1Q91V04 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.87■□□□□ 0.29
Tram1Q91V04 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.87■□□□□ 0.29
Tram1Q91V04 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Tram1Q91V04 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tram1Q91V04 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Tram1Q91V04 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tram1Q91V04 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tram1Q91V04 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tram1Q91V04 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tram1Q91V04 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tram1Q91V04 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tram1Q91V04 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tram1Q91V04 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tram1Q91V04 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tram1Q91V04 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tram1Q91V04 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tram1Q91V04 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tram1Q91V04 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.86■□□□□ 0.29
Tram1Q91V04 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Tram1Q91V04 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tram1Q91V04 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tram1Q91V04 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tram1Q91V04 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms