Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm1Q8VC85 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm1Q8VC85 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.93■□□□□ 0.62
Lsm1Q8VC85 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm1Q8VC85 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm1Q8VC85 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm1Q8VC85 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm1Q8VC85 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lsm1Q8VC85 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm1Q8VC85 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm1Q8VC85 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm1Q8VC85 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm1Q8VC85 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm1Q8VC85 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.91■□□□□ 0.62
Lsm1Q8VC85 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm1Q8VC85 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Gm9959-201ENSMUST00000068277 390 ntBASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm1Q8VC85 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Gm22238-201ENSMUST00000175222 88 ntBASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm1Q8VC85 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm1Q8VC85 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.88■□□□□ 0.61
Lsm1Q8VC85 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.88■□□□□ 0.61
Lsm1Q8VC85 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.88■□□□□ 0.61
Lsm1Q8VC85 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm1Q8VC85 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm1Q8VC85 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm1Q8VC85 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Lsm1Q8VC85 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm1Q8VC85 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm1Q8VC85 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm1Q8VC85 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm1Q8VC85 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm1Q8VC85 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm1Q8VC85 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm1Q8VC85 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm1Q8VC85 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Lsm1Q8VC85 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.85■□□□□ 0.61
Lsm1Q8VC85 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.85■□□□□ 0.61
Lsm1Q8VC85 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm1Q8VC85 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm1Q8VC85 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm1Q8VC85 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm1Q8VC85 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm1Q8VC85 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm1Q8VC85 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm1Q8VC85 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm1Q8VC85 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm1Q8VC85 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Lsm1Q8VC85 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm1Q8VC85 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.84■□□□□ 0.61
Lsm1Q8VC85 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm1Q8VC85 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm1Q8VC85 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm1Q8VC85 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lsm1Q8VC85 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lsm1Q8VC85 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms