Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna3Q8R4G9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.36■□□□□ 0.69
Chrna3Q8R4G9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna3Q8R4G9 Smad6-203ENSMUST00000179458 273 ntBASIC19.36■□□□□ 0.69
Chrna3Q8R4G9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna3Q8R4G9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna3Q8R4G9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Chrna3Q8R4G9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Chrna3Q8R4G9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chrna3Q8R4G9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Chrna3Q8R4G9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.35■□□□□ 0.69
Chrna3Q8R4G9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.34■□□□□ 0.69
Chrna3Q8R4G9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.34■□□□□ 0.69
Chrna3Q8R4G9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna3Q8R4G9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
Chrna3Q8R4G9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chrna3Q8R4G9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna3Q8R4G9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Chrna3Q8R4G9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna3Q8R4G9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna3Q8R4G9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna3Q8R4G9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Chrna3Q8R4G9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna3Q8R4G9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Chrna3Q8R4G9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna3Q8R4G9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna3Q8R4G9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna3Q8R4G9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna3Q8R4G9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna3Q8R4G9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna3Q8R4G9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.33■□□□□ 0.68
Chrna3Q8R4G9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna3Q8R4G9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna3Q8R4G9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Chrna3Q8R4G9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna3Q8R4G9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Chrna3Q8R4G9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.32■□□□□ 0.68
Chrna3Q8R4G9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna3Q8R4G9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna3Q8R4G9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.31■□□□□ 0.68
Chrna3Q8R4G9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna3Q8R4G9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.31■□□□□ 0.68
Chrna3Q8R4G9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.31■□□□□ 0.68
Chrna3Q8R4G9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna3Q8R4G9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna3Q8R4G9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna3Q8R4G9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna3Q8R4G9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Chrna3Q8R4G9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna3Q8R4G9 Gm43060-201ENSMUST00000200621 289 ntBASIC19.3■□□□□ 0.68
Chrna3Q8R4G9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna3Q8R4G9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.3■□□□□ 0.68
Chrna3Q8R4G9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Chrna3Q8R4G9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Chrna3Q8R4G9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Chrna3Q8R4G9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna3Q8R4G9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chrna3Q8R4G9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna3Q8R4G9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna3Q8R4G9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna3Q8R4G9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna3Q8R4G9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms