Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Gm29994-201ENSMUST00000195495 1193 ntBASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 CT010467.1-202ENSMUST00000205406 714 ntBASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Gm38205-201ENSMUST00000192243 258 ntBASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ddx54Q8K4L0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx54Q8K4L0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx54Q8K4L0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC26.12■■□□□ 1.77
Ddx54Q8K4L0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx54Q8K4L0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Ddx54Q8K4L0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
Ddx54Q8K4L0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ddx54Q8K4L0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Ddx54Q8K4L0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Gm10655-201ENSMUST00000098658 1397 ntBASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 CT030146.1-201ENSMUST00000220919 217 ntBASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx54Q8K4L0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC26.07■■□□□ 1.76
Ddx54Q8K4L0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx54Q8K4L0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Gm27275-201ENSMUST00000184318 272 ntBASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Arhgef33-211ENSMUST00000225658 473 ntBASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx54Q8K4L0 Gm6576-201ENSMUST00000169678 883 ntBASIC26.02■■□□□ 1.76
Ddx54Q8K4L0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms