Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx54Q8K4L0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Gm29994-201ENSMUST00000195495 1193 ntBASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 CT010467.1-202ENSMUST00000205406 714 ntBASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx54Q8K4L0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Gm38205-201ENSMUST00000192243 258 ntBASIC26.14■■□□□ 1.78
Ddx54Q8K4L0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ddx54Q8K4L0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx54Q8K4L0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx54Q8K4L0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx54Q8K4L0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC26.12■■□□□ 1.77
Ddx54Q8K4L0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx54Q8K4L0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Ddx54Q8K4L0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC26.11■■□□□ 1.77
Ddx54Q8K4L0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
Ddx54Q8K4L0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ddx54Q8K4L0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Ddx54Q8K4L0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx54Q8K4L0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Gm10655-201ENSMUST00000098658 1397 ntBASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 CT030146.1-201ENSMUST00000220919 217 ntBASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.77
Ddx54Q8K4L0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx54Q8K4L0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC26.07■■□□□ 1.76
Ddx54Q8K4L0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx54Q8K4L0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx54Q8K4L0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx54Q8K4L0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.04■■□□□ 1.76
Ddx54Q8K4L0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Gm27275-201ENSMUST00000184318 272 ntBASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Arhgef33-211ENSMUST00000225658 473 ntBASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx54Q8K4L0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx54Q8K4L0 Gm6576-201ENSMUST00000169678 883 ntBASIC26.02■■□□□ 1.76
Ddx54Q8K4L0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms