Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alms1Q8K4E0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Gm13234-201ENSMUST00000120010 747 ntBASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Gm11421-201ENSMUST00000122124 294 ntBASIC19.42■□□□□ 0.7
Alms1Q8K4E0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Alms1Q8K4E0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alms1Q8K4E0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alms1Q8K4E0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.41■□□□□ 0.7
Alms1Q8K4E0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.41■□□□□ 0.7
Alms1Q8K4E0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alms1Q8K4E0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alms1Q8K4E0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Alms1Q8K4E0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Alms1Q8K4E0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Alms1Q8K4E0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Alms1Q8K4E0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Alms1Q8K4E0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
Alms1Q8K4E0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alms1Q8K4E0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alms1Q8K4E0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alms1Q8K4E0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.39■□□□□ 0.69
Alms1Q8K4E0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alms1Q8K4E0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alms1Q8K4E0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alms1Q8K4E0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Alms1Q8K4E0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alms1Q8K4E0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alms1Q8K4E0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alms1Q8K4E0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alms1Q8K4E0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.38■□□□□ 0.69
Alms1Q8K4E0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alms1Q8K4E0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alms1Q8K4E0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alms1Q8K4E0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Alms1Q8K4E0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Alms1Q8K4E0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Alms1Q8K4E0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.37■□□□□ 0.69
Alms1Q8K4E0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Alms1Q8K4E0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Alms1Q8K4E0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alms1Q8K4E0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alms1Q8K4E0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alms1Q8K4E0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alms1Q8K4E0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Alms1Q8K4E0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.36■□□□□ 0.69
Alms1Q8K4E0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Gm27801-201ENSMUST00000184174 223 ntBASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms