Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.34□□□□□ -0.43
Cystm1Q8K353 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cystm1Q8K353 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cystm1Q8K353 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Gm5131-201ENSMUST00000212776 1238 ntBASIC12.33□□□□□ -0.44
Cystm1Q8K353 AC158990.1-201ENSMUST00000221450 2016 ntBASIC12.33□□□□□ -0.44
Cystm1Q8K353 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cystm1Q8K353 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cystm1Q8K353 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cystm1Q8K353 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cystm1Q8K353 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC12.32□□□□□ -0.44
Cystm1Q8K353 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cystm1Q8K353 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cystm1Q8K353 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cystm1Q8K353 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cystm1Q8K353 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cystm1Q8K353 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cystm1Q8K353 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cystm1Q8K353 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.31□□□□□ -0.44
Cystm1Q8K353 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cystm1Q8K353 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cystm1Q8K353 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cystm1Q8K353 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cystm1Q8K353 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC12.31□□□□□ -0.44
Cystm1Q8K353 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.31□□□□□ -0.44
Cystm1Q8K353 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cystm1Q8K353 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cystm1Q8K353 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cystm1Q8K353 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cystm1Q8K353 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cystm1Q8K353 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cystm1Q8K353 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cystm1Q8K353 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.29□□□□□ -0.44
Cystm1Q8K353 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC12.29□□□□□ -0.44
Cystm1Q8K353 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC12.29□□□□□ -0.44
Cystm1Q8K353 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.29□□□□□ -0.44
Cystm1Q8K353 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Fst-202ENSMUST00000223640 2612 ntBASIC12.29□□□□□ -0.44
Cystm1Q8K353 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cystm1Q8K353 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cystm1Q8K353 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC12.28□□□□□ -0.44
Cystm1Q8K353 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms