Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Sox30Q8CGW4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Sox30Q8CGW4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Sox30Q8CGW4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox30Q8CGW4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sox30Q8CGW4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.7■■□□□ 1.06
Sox30Q8CGW4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Sox30Q8CGW4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox30Q8CGW4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Sox30Q8CGW4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox30Q8CGW4 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox30Q8CGW4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox30Q8CGW4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox30Q8CGW4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.68■■□□□ 1.06
Sox30Q8CGW4 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.68■■□□□ 1.06
Sox30Q8CGW4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox30Q8CGW4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox30Q8CGW4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox30Q8CGW4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox30Q8CGW4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.67■■□□□ 1.06
Sox30Q8CGW4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Sox30Q8CGW4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox30Q8CGW4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox30Q8CGW4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox30Q8CGW4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sox30Q8CGW4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sox30Q8CGW4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.67■■□□□ 1.06
Sox30Q8CGW4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.67■■□□□ 1.06
Sox30Q8CGW4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox30Q8CGW4 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 AA386476-201ENSMUST00000098781 1665 ntBASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox30Q8CGW4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sox30Q8CGW4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Sox30Q8CGW4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox30Q8CGW4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sox30Q8CGW4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox30Q8CGW4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox30Q8CGW4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Sox30Q8CGW4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox30Q8CGW4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox30Q8CGW4 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox30Q8CGW4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms