Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col6a6Q8C6K9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Col6a6Q8C6K9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.88■□□□□ 0.45
Col6a6Q8C6K9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a6Q8C6K9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a6Q8C6K9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a6Q8C6K9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a6Q8C6K9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a6Q8C6K9 Gm20760-201ENSMUST00000179197 648 ntBASIC17.88■□□□□ 0.45
Col6a6Q8C6K9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a6Q8C6K9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a6Q8C6K9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a6Q8C6K9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Col6a6Q8C6K9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Col6a6Q8C6K9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a6Q8C6K9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a6Q8C6K9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.85■□□□□ 0.45
Col6a6Q8C6K9 Gm20049-201ENSMUST00000219950 730 ntBASIC17.85■□□□□ 0.45
Col6a6Q8C6K9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a6Q8C6K9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a6Q8C6K9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a6Q8C6K9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a6Q8C6K9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a6Q8C6K9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a6Q8C6K9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col6a6Q8C6K9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.83■□□□□ 0.45
Col6a6Q8C6K9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col6a6Q8C6K9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col6a6Q8C6K9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col6a6Q8C6K9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a6Q8C6K9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a6Q8C6K9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Col6a6Q8C6K9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a6Q8C6K9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a6Q8C6K9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Col6a6Q8C6K9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Gm13146-201ENSMUST00000118508 780 ntBASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.81■□□□□ 0.44
Col6a6Q8C6K9 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms