Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Cps1Q8C196 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC27.12■■□□□ 1.93
Cps1Q8C196 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cps1Q8C196 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cps1Q8C196 Gm13534-201ENSMUST00000121169 513 ntBASIC27.11■■□□□ 1.93
Cps1Q8C196 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
Cps1Q8C196 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC27.11■■□□□ 1.93
Cps1Q8C196 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Cps1Q8C196 Gm42911-201ENSMUST00000199360 1630 ntBASIC27.11■■□□□ 1.93
Cps1Q8C196 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cps1Q8C196 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cps1Q8C196 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Cps1Q8C196 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC27.11■■□□□ 1.93
Cps1Q8C196 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC27.1■■□□□ 1.93
Cps1Q8C196 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC27.1■■□□□ 1.93
Cps1Q8C196 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cps1Q8C196 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC27.1■■□□□ 1.93
Cps1Q8C196 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cps1Q8C196 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cps1Q8C196 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cps1Q8C196 AC122769.4-201ENSMUST00000228166 901 ntBASIC27.09■■□□□ 1.93
Cps1Q8C196 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC27.09■■□□□ 1.93
Cps1Q8C196 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cps1Q8C196 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Cps1Q8C196 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cps1Q8C196 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
Cps1Q8C196 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Cps1Q8C196 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cps1Q8C196 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cps1Q8C196 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cps1Q8C196 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cps1Q8C196 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Cps1Q8C196 Gm26766-202ENSMUST00000227544 2347 ntBASIC27.07■■□□□ 1.92
Cps1Q8C196 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cps1Q8C196 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Cps1Q8C196 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Cps1Q8C196 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
Cps1Q8C196 Gm5408-201ENSMUST00000197998 747 ntBASIC27.06■■□□□ 1.92
Cps1Q8C196 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC27.06■■□□□ 1.92
Cps1Q8C196 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Cps1Q8C196 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Cps1Q8C196 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Cps1Q8C196 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC27.06■■□□□ 1.92
Cps1Q8C196 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cps1Q8C196 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Cps1Q8C196 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cps1Q8C196 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Cps1Q8C196 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cps1Q8C196 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cps1Q8C196 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cps1Q8C196 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Cps1Q8C196 Gm6420-201ENSMUST00000193885 723 ntBASIC27.04■■□□□ 1.92
Cps1Q8C196 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Cps1Q8C196 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Cps1Q8C196 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Cps1Q8C196 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC27.03■■□□□ 1.92
Cps1Q8C196 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Cps1Q8C196 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
Cps1Q8C196 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Cps1Q8C196 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC27.02■■□□□ 1.92
Cps1Q8C196 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Cps1Q8C196 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cps1Q8C196 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC27.02■■□□□ 1.92
Cps1Q8C196 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cps1Q8C196 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Cps1Q8C196 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cps1Q8C196 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Cps1Q8C196 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cps1Q8C196 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.92
Cps1Q8C196 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Cps1Q8C196 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC27.01■■□□□ 1.91
Cps1Q8C196 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC27.01■■□□□ 1.91
Cps1Q8C196 Gm20049-201ENSMUST00000219950 730 ntBASIC27.01■■□□□ 1.91
Cps1Q8C196 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC27.01■■□□□ 1.91
Cps1Q8C196 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
Cps1Q8C196 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Cps1Q8C196 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Cps1Q8C196 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Cps1Q8C196 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Cps1Q8C196 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Cps1Q8C196 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC27■■□□□ 1.91
Cps1Q8C196 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Cps1Q8C196 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC27■■□□□ 1.91
Cps1Q8C196 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC27■■□□□ 1.91
Cps1Q8C196 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC27■■□□□ 1.91
Cps1Q8C196 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Cps1Q8C196 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC26.99■■□□□ 1.91
Cps1Q8C196 Gm3807-201ENSMUST00000193520 1168 ntBASIC26.99■■□□□ 1.91
Cps1Q8C196 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Cps1Q8C196 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Cps1Q8C196 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cps1Q8C196 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Cps1Q8C196 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC26.98■■□□□ 1.91
Cps1Q8C196 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC26.98■■□□□ 1.91
Cps1Q8C196 Gm22240-201ENSMUST00000175225 82 ntBASIC26.98■■□□□ 1.91
Cps1Q8C196 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Cps1Q8C196 Gm10252-201ENSMUST00000209541 832 ntBASIC26.98■■□□□ 1.91
Cps1Q8C196 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cps1Q8C196 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cps1Q8C196 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms