Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps9d1Q8C190 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps9d1Q8C190 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps9d1Q8C190 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps9d1Q8C190 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps9d1Q8C190 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.4■□□□□ 0.54
Vps9d1Q8C190 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.4■□□□□ 0.54
Vps9d1Q8C190 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vps9d1Q8C190 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps9d1Q8C190 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps9d1Q8C190 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps9d1Q8C190 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps9d1Q8C190 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps9d1Q8C190 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps9d1Q8C190 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Vps9d1Q8C190 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.39■□□□□ 0.53
Vps9d1Q8C190 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps9d1Q8C190 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps9d1Q8C190 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.38■□□□□ 0.53
Vps9d1Q8C190 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vps9d1Q8C190 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps9d1Q8C190 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps9d1Q8C190 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps9d1Q8C190 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps9d1Q8C190 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps9d1Q8C190 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Vps9d1Q8C190 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps9d1Q8C190 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Vps9d1Q8C190 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.37■□□□□ 0.53
Vps9d1Q8C190 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps9d1Q8C190 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps9d1Q8C190 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps9d1Q8C190 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps9d1Q8C190 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps9d1Q8C190 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.37■□□□□ 0.53
Vps9d1Q8C190 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
Vps9d1Q8C190 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps9d1Q8C190 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.36■□□□□ 0.53
Vps9d1Q8C190 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps9d1Q8C190 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps9d1Q8C190 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps9d1Q8C190 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps9d1Q8C190 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps9d1Q8C190 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps9d1Q8C190 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Gm15039-201ENSMUST00000118914 875 ntBASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Vps9d1Q8C190 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Gm7417-201ENSMUST00000192950 473 ntBASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps9d1Q8C190 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps9d1Q8C190 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps9d1Q8C190 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Vps9d1Q8C190 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.33■□□□□ 0.52
Vps9d1Q8C190 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.33■□□□□ 0.52
Vps9d1Q8C190 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps9d1Q8C190 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.33■□□□□ 0.52
Vps9d1Q8C190 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps9d1Q8C190 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Gm7143-201ENSMUST00000222811 859 ntBASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps9d1Q8C190 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps9d1Q8C190 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps9d1Q8C190 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Vps9d1Q8C190 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps9d1Q8C190 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps9d1Q8C190 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.31■□□□□ 0.52
Vps9d1Q8C190 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps9d1Q8C190 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms