Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne1Q8C166 Gm12821-201ENSMUST00000120022 600 ntBASIC18.42■□□□□ 0.54
Cpne1Q8C166 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cpne1Q8C166 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.42■□□□□ 0.54
Cpne1Q8C166 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cpne1Q8C166 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.42■□□□□ 0.54
Cpne1Q8C166 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Cpne1Q8C166 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne1Q8C166 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Cpne1Q8C166 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.42■□□□□ 0.54
Cpne1Q8C166 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Gm27454-201ENSMUST00000185090 204 ntBASIC18.41■□□□□ 0.54
Cpne1Q8C166 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne1Q8C166 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne1Q8C166 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cpne1Q8C166 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cpne1Q8C166 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne1Q8C166 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Cpne1Q8C166 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cpne1Q8C166 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.39■□□□□ 0.53
Cpne1Q8C166 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne1Q8C166 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne1Q8C166 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne1Q8C166 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cpne1Q8C166 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne1Q8C166 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne1Q8C166 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Cpne1Q8C166 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne1Q8C166 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne1Q8C166 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne1Q8C166 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.38■□□□□ 0.53
Cpne1Q8C166 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne1Q8C166 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne1Q8C166 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne1Q8C166 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne1Q8C166 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne1Q8C166 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne1Q8C166 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne1Q8C166 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.37■□□□□ 0.53
Cpne1Q8C166 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Cpne1Q8C166 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne1Q8C166 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.37■□□□□ 0.53
Cpne1Q8C166 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne1Q8C166 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cpne1Q8C166 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne1Q8C166 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.36■□□□□ 0.53
Cpne1Q8C166 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cpne1Q8C166 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Gm45417-201ENSMUST00000209533 758 ntBASIC18.35■□□□□ 0.53
Cpne1Q8C166 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.35■□□□□ 0.53
Cpne1Q8C166 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cpne1Q8C166 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cpne1Q8C166 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cpne1Q8C166 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne1Q8C166 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne1Q8C166 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne1Q8C166 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms