Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne3Q8BT60 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.99■□□□□ 0.63
Cpne3Q8BT60 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.98■□□□□ 0.63
Cpne3Q8BT60 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Gm9959-201ENSMUST00000068277 390 ntBASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne3Q8BT60 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.97■□□□□ 0.63
Cpne3Q8BT60 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne3Q8BT60 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne3Q8BT60 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cpne3Q8BT60 Mir6236-201ENSMUST00000184437 123 ntBASIC18.96■□□□□ 0.63
Cpne3Q8BT60 Gm43530-201ENSMUST00000195920 274 ntBASIC18.96■□□□□ 0.63
Cpne3Q8BT60 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.96■□□□□ 0.63
Cpne3Q8BT60 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne3Q8BT60 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne3Q8BT60 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne3Q8BT60 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne3Q8BT60 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne3Q8BT60 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cpne3Q8BT60 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.93■□□□□ 0.62
Cpne3Q8BT60 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne3Q8BT60 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.93■□□□□ 0.62
Cpne3Q8BT60 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cpne3Q8BT60 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne3Q8BT60 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne3Q8BT60 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne3Q8BT60 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne3Q8BT60 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne3Q8BT60 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms