Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sfr1Q8BP27 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sfr1Q8BP27 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sfr1Q8BP27 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sfr1Q8BP27 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sfr1Q8BP27 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sfr1Q8BP27 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sfr1Q8BP27 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sfr1Q8BP27 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sfr1Q8BP27 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sfr1Q8BP27 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sfr1Q8BP27 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sfr1Q8BP27 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sfr1Q8BP27 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sfr1Q8BP27 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sfr1Q8BP27 Gm8493-201ENSMUST00000196881 489 ntBASIC19.96■□□□□ 0.79
Sfr1Q8BP27 Gm6139-201ENSMUST00000079261 882 ntBASIC19.96■□□□□ 0.79
Sfr1Q8BP27 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sfr1Q8BP27 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Sfr1Q8BP27 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Sfr1Q8BP27 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sfr1Q8BP27 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sfr1Q8BP27 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Sfr1Q8BP27 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sfr1Q8BP27 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sfr1Q8BP27 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sfr1Q8BP27 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sfr1Q8BP27 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sfr1Q8BP27 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sfr1Q8BP27 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.94■□□□□ 0.78
Sfr1Q8BP27 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sfr1Q8BP27 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.94■□□□□ 0.78
Sfr1Q8BP27 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sfr1Q8BP27 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sfr1Q8BP27 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sfr1Q8BP27 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sfr1Q8BP27 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.94■□□□□ 0.78
Sfr1Q8BP27 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sfr1Q8BP27 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sfr1Q8BP27 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sfr1Q8BP27 Gm12251-201ENSMUST00000117893 792 ntBASIC19.93■□□□□ 0.78
Sfr1Q8BP27 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sfr1Q8BP27 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sfr1Q8BP27 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sfr1Q8BP27 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sfr1Q8BP27 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sfr1Q8BP27 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Sfr1Q8BP27 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Sfr1Q8BP27 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sfr1Q8BP27 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sfr1Q8BP27 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.9■□□□□ 0.78
Sfr1Q8BP27 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.9■□□□□ 0.78
Sfr1Q8BP27 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sfr1Q8BP27 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sfr1Q8BP27 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sfr1Q8BP27 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sfr1Q8BP27 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sfr1Q8BP27 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sfr1Q8BP27 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms