Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Prpf18Q8BM39 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf18Q8BM39 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf18Q8BM39 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf18Q8BM39 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf18Q8BM39 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf18Q8BM39 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf18Q8BM39 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf18Q8BM39 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf18Q8BM39 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf18Q8BM39 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf18Q8BM39 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf18Q8BM39 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf18Q8BM39 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf18Q8BM39 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf18Q8BM39 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf18Q8BM39 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf18Q8BM39 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prpf18Q8BM39 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf18Q8BM39 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf18Q8BM39 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf18Q8BM39 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.63■□□□□ 0.57
Prpf18Q8BM39 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Gm10399-202ENSMUST00000202768 748 ntBASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf18Q8BM39 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.61■□□□□ 0.57
Prpf18Q8BM39 Gm10232-201ENSMUST00000089221 720 ntBASIC18.61■□□□□ 0.57
Prpf18Q8BM39 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf18Q8BM39 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf18Q8BM39 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf18Q8BM39 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf18Q8BM39 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Prpf18Q8BM39 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf18Q8BM39 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf18Q8BM39 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.6■□□□□ 0.57
Prpf18Q8BM39 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf18Q8BM39 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf18Q8BM39 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.6■□□□□ 0.57
Prpf18Q8BM39 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Prpf18Q8BM39 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Prpf18Q8BM39 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf18Q8BM39 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf18Q8BM39 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Prpf18Q8BM39 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.59■□□□□ 0.57
Prpf18Q8BM39 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf18Q8BM39 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf18Q8BM39 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Prpf18Q8BM39 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf18Q8BM39 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf18Q8BM39 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Prpf18Q8BM39 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf18Q8BM39 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf18Q8BM39 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.58■□□□□ 0.56
Prpf18Q8BM39 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf18Q8BM39 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf18Q8BM39 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms