Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cdhr3Q8BL00 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cdhr3Q8BL00 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdhr3Q8BL00 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr3Q8BL00 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Gm43530-201ENSMUST00000195920 274 ntBASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr3Q8BL00 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr3Q8BL00 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Cdhr3Q8BL00 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr3Q8BL00 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdhr3Q8BL00 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdhr3Q8BL00 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr3Q8BL00 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cdhr3Q8BL00 Gm9870-201ENSMUST00000063874 645 ntBASIC17.16■□□□□ 0.34
Cdhr3Q8BL00 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cdhr3Q8BL00 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr3Q8BL00 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr3Q8BL00 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr3Q8BL00 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr3Q8BL00 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr3Q8BL00 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdhr3Q8BL00 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.15■□□□□ 0.34
Cdhr3Q8BL00 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr3Q8BL00 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr3Q8BL00 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cdhr3Q8BL00 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr3Q8BL00 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr3Q8BL00 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdhr3Q8BL00 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdhr3Q8BL00 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdhr3Q8BL00 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms