Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim6Q8BGE7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.87■□□□□ 0.93
Trim6Q8BGE7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trim6Q8BGE7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim6Q8BGE7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim6Q8BGE7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim6Q8BGE7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trim6Q8BGE7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim6Q8BGE7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim6Q8BGE7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim6Q8BGE7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trim6Q8BGE7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim6Q8BGE7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim6Q8BGE7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Trim6Q8BGE7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim6Q8BGE7 Gm10232-201ENSMUST00000089221 720 ntBASIC20.85■□□□□ 0.93
Trim6Q8BGE7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim6Q8BGE7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim6Q8BGE7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim6Q8BGE7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim6Q8BGE7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim6Q8BGE7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim6Q8BGE7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim6Q8BGE7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim6Q8BGE7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim6Q8BGE7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim6Q8BGE7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim6Q8BGE7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim6Q8BGE7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim6Q8BGE7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim6Q8BGE7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.84■□□□□ 0.93
Trim6Q8BGE7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim6Q8BGE7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim6Q8BGE7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim6Q8BGE7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim6Q8BGE7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim6Q8BGE7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim6Q8BGE7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.83■□□□□ 0.93
Trim6Q8BGE7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.83■□□□□ 0.93
Trim6Q8BGE7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim6Q8BGE7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim6Q8BGE7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim6Q8BGE7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim6Q8BGE7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim6Q8BGE7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim6Q8BGE7 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.81■□□□□ 0.92
Trim6Q8BGE7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim6Q8BGE7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
Trim6Q8BGE7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.81■□□□□ 0.92
Trim6Q8BGE7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim6Q8BGE7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim6Q8BGE7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim6Q8BGE7 Golph3-205ENSMUST00000228671 2842 ntBASIC20.8■□□□□ 0.92
Trim6Q8BGE7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim6Q8BGE7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim6Q8BGE7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim6Q8BGE7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Trim6Q8BGE7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim6Q8BGE7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim6Q8BGE7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim6Q8BGE7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim6Q8BGE7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim6Q8BGE7 Gm7143-201ENSMUST00000222811 859 ntBASIC20.79■□□□□ 0.92
Trim6Q8BGE7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim6Q8BGE7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim6Q8BGE7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim6Q8BGE7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim6Q8BGE7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim6Q8BGE7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Trim6Q8BGE7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim6Q8BGE7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim6Q8BGE7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim6Q8BGE7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim6Q8BGE7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim6Q8BGE7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Trim6Q8BGE7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim6Q8BGE7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Trim6Q8BGE7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms