Protein–RNA interactions for Protein: Q8BFS6

Cpped1, Serine/threonine-protein phosphatase CPPED1, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpped1Q8BFS6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpped1Q8BFS6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpped1Q8BFS6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpped1Q8BFS6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpped1Q8BFS6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.31■□□□□ 0.68
Cpped1Q8BFS6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cpped1Q8BFS6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Cpped1Q8BFS6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cpped1Q8BFS6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpped1Q8BFS6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpped1Q8BFS6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpped1Q8BFS6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpped1Q8BFS6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpped1Q8BFS6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpped1Q8BFS6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cpped1Q8BFS6 Gm43137-201ENSMUST00000198052 594 ntBASIC19.28■□□□□ 0.68
Cpped1Q8BFS6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpped1Q8BFS6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cpped1Q8BFS6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.27■□□□□ 0.68
Cpped1Q8BFS6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cpped1Q8BFS6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpped1Q8BFS6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cpped1Q8BFS6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpped1Q8BFS6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpped1Q8BFS6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpped1Q8BFS6 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 Gm45417-201ENSMUST00000209533 758 ntBASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpped1Q8BFS6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cpped1Q8BFS6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpped1Q8BFS6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpped1Q8BFS6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpped1Q8BFS6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.25■□□□□ 0.67
Cpped1Q8BFS6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpped1Q8BFS6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpped1Q8BFS6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpped1Q8BFS6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpped1Q8BFS6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpped1Q8BFS6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpped1Q8BFS6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpped1Q8BFS6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpped1Q8BFS6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpped1Q8BFS6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.24■□□□□ 0.67
Cpped1Q8BFS6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.24■□□□□ 0.67
Cpped1Q8BFS6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpped1Q8BFS6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpped1Q8BFS6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.23■□□□□ 0.67
Cpped1Q8BFS6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpped1Q8BFS6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpped1Q8BFS6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpped1Q8BFS6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpped1Q8BFS6 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.23■□□□□ 0.67
Cpped1Q8BFS6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpped1Q8BFS6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpped1Q8BFS6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpped1Q8BFS6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Mir6236-201ENSMUST00000184437 123 ntBASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpped1Q8BFS6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms