Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox21Q811W0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Sox21Q811W0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox21Q811W0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox21Q811W0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox21Q811W0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox21Q811W0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
Sox21Q811W0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.1■□□□□ 0.17
Sox21Q811W0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox21Q811W0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.1■□□□□ 0.17
Sox21Q811W0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox21Q811W0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox21Q811W0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sox21Q811W0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Sox21Q811W0 Gm29257-201ENSMUST00000186115 639 ntBASIC16.09■□□□□ 0.17
Sox21Q811W0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sox21Q811W0 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.09■□□□□ 0.17
Sox21Q811W0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox21Q811W0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox21Q811W0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sox21Q811W0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sox21Q811W0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sox21Q811W0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sox21Q811W0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sox21Q811W0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox21Q811W0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.16
Sox21Q811W0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.08■□□□□ 0.16
Sox21Q811W0 Gm43060-201ENSMUST00000200621 289 ntBASIC16.08■□□□□ 0.16
Sox21Q811W0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox21Q811W0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox21Q811W0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Sox21Q811W0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox21Q811W0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox21Q811W0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox21Q811W0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sox21Q811W0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox21Q811W0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.07■□□□□ 0.16
Sox21Q811W0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.07■□□□□ 0.16
Sox21Q811W0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sox21Q811W0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox21Q811W0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Sox21Q811W0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Gm26571-201ENSMUST00000181399 666 ntBASIC16.06■□□□□ 0.16
Sox21Q811W0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox21Q811W0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox21Q811W0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.05■□□□□ 0.16
Sox21Q811W0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.05■□□□□ 0.16
Sox21Q811W0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.05■□□□□ 0.16
Sox21Q811W0 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.05■□□□□ 0.16
Sox21Q811W0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox21Q811W0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Sox21Q811W0 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.05■□□□□ 0.16
Sox21Q811W0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox21Q811W0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sox21Q811W0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.04■□□□□ 0.16
Sox21Q811W0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 Smad6-203ENSMUST00000179458 273 ntBASIC16.04■□□□□ 0.16
Sox21Q811W0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Sox21Q811W0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Sox21Q811W0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox21Q811W0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox21Q811W0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox21Q811W0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox21Q811W0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox21Q811W0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox21Q811W0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.03■□□□□ 0.16
Sox21Q811W0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sox21Q811W0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sox21Q811W0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.03■□□□□ 0.16
Sox21Q811W0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms