Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Skida1Q80YR3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Skida1Q80YR3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Skida1Q80YR3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Skida1Q80YR3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Skida1Q80YR3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Skida1Q80YR3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.27■□□□□ 0.68
Skida1Q80YR3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.27■□□□□ 0.68
Skida1Q80YR3 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC19.27■□□□□ 0.68
Skida1Q80YR3 Gm2594-201ENSMUST00000214774 742 ntBASIC19.27■□□□□ 0.68
Skida1Q80YR3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Skida1Q80YR3 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.26■□□□□ 0.67
Skida1Q80YR3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.26■□□□□ 0.67
Skida1Q80YR3 CT025561.1-201ENSMUST00000214972 674 ntBASIC19.26■□□□□ 0.67
Skida1Q80YR3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Skida1Q80YR3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Skida1Q80YR3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Skida1Q80YR3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.25■□□□□ 0.67
Skida1Q80YR3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Skida1Q80YR3 Gm26833-201ENSMUST00000180899 440 ntBASIC19.25■□□□□ 0.67
Skida1Q80YR3 Gm27405-201ENSMUST00000184201 112 ntBASIC19.25■□□□□ 0.67
Skida1Q80YR3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Skida1Q80YR3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Skida1Q80YR3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.24■□□□□ 0.67
Skida1Q80YR3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Gm17917-201ENSMUST00000218561 953 ntBASIC19.24■□□□□ 0.67
Skida1Q80YR3 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.24■□□□□ 0.67
Skida1Q80YR3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Gm10493-201ENSMUST00000097270 612 ntBASIC19.24■□□□□ 0.67
Skida1Q80YR3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Skida1Q80YR3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Skida1Q80YR3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Skida1Q80YR3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Skida1Q80YR3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Skida1Q80YR3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Skida1Q80YR3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Skida1Q80YR3 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.23■□□□□ 0.67
Skida1Q80YR3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Skida1Q80YR3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Skida1Q80YR3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Skida1Q80YR3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Skida1Q80YR3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.22■□□□□ 0.67
Skida1Q80YR3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Skida1Q80YR3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Skida1Q80YR3 Gm12251-201ENSMUST00000117893 792 ntBASIC19.22■□□□□ 0.67
Skida1Q80YR3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Skida1Q80YR3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.22■□□□□ 0.67
Skida1Q80YR3 Gm43060-201ENSMUST00000200621 289 ntBASIC19.22■□□□□ 0.67
Skida1Q80YR3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Skida1Q80YR3 Gm7143-201ENSMUST00000222811 859 ntBASIC19.22■□□□□ 0.67
Skida1Q80YR3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Skida1Q80YR3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Skida1Q80YR3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.22■□□□□ 0.67
Skida1Q80YR3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Skida1Q80YR3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Skida1Q80YR3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Skida1Q80YR3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Gm14201-201ENSMUST00000117627 289 ntBASIC19.21■□□□□ 0.67
Skida1Q80YR3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Gm42919-201ENSMUST00000197753 1284 ntBASIC19.21■□□□□ 0.67
Skida1Q80YR3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Skida1Q80YR3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Skida1Q80YR3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Skida1Q80YR3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Skida1Q80YR3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Skida1Q80YR3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Skida1Q80YR3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Skida1Q80YR3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Skida1Q80YR3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Skida1Q80YR3 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC19.2■□□□□ 0.66
Skida1Q80YR3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Skida1Q80YR3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Skida1Q80YR3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Skida1Q80YR3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms