Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nup188Q6ZQH8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nup188Q6ZQH8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC23.87■■□□□ 1.41
Nup188Q6ZQH8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.87■■□□□ 1.41
Nup188Q6ZQH8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Nup188Q6ZQH8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nup188Q6ZQH8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nup188Q6ZQH8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Nup188Q6ZQH8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Nup188Q6ZQH8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.86■■□□□ 1.41
Nup188Q6ZQH8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nup188Q6ZQH8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nup188Q6ZQH8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.86■■□□□ 1.41
Nup188Q6ZQH8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nup188Q6ZQH8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC23.86■■□□□ 1.41
Nup188Q6ZQH8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Nup188Q6ZQH8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nup188Q6ZQH8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nup188Q6ZQH8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nup188Q6ZQH8 Gm12527-201ENSMUST00000117967 564 ntBASIC23.85■■□□□ 1.41
Nup188Q6ZQH8 Gm22240-201ENSMUST00000175225 82 ntBASIC23.85■■□□□ 1.41
Nup188Q6ZQH8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Nup188Q6ZQH8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nup188Q6ZQH8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.84■■□□□ 1.41
Nup188Q6ZQH8 Gm26524-201ENSMUST00000192339 390 ntBASIC23.84■■□□□ 1.41
Nup188Q6ZQH8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nup188Q6ZQH8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nup188Q6ZQH8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nup188Q6ZQH8 Gm6211-202ENSMUST00000167849 925 ntBASIC23.83■■□□□ 1.41
Nup188Q6ZQH8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.83■■□□□ 1.41
Nup188Q6ZQH8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Nup188Q6ZQH8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nup188Q6ZQH8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nup188Q6ZQH8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Nup188Q6ZQH8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.83■■□□□ 1.4
Nup188Q6ZQH8 Gm38205-201ENSMUST00000192243 258 ntBASIC23.83■■□□□ 1.4
Nup188Q6ZQH8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Nup188Q6ZQH8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Nup188Q6ZQH8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nup188Q6ZQH8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Nup188Q6ZQH8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Nup188Q6ZQH8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nup188Q6ZQH8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nup188Q6ZQH8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nup188Q6ZQH8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.81■■□□□ 1.4
Nup188Q6ZQH8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nup188Q6ZQH8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Nup188Q6ZQH8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Nup188Q6ZQH8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Nup188Q6ZQH8 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.81■■□□□ 1.4
Nup188Q6ZQH8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nup188Q6ZQH8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.8■■□□□ 1.4
Nup188Q6ZQH8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.8■■□□□ 1.4
Nup188Q6ZQH8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nup188Q6ZQH8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Nup188Q6ZQH8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nup188Q6ZQH8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.8■■□□□ 1.4
Nup188Q6ZQH8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nup188Q6ZQH8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Nup188Q6ZQH8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Nup188Q6ZQH8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.79■■□□□ 1.4
Nup188Q6ZQH8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup188Q6ZQH8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup188Q6ZQH8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup188Q6ZQH8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nup188Q6ZQH8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup188Q6ZQH8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nup188Q6ZQH8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Nup188Q6ZQH8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Nup188Q6ZQH8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nup188Q6ZQH8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nup188Q6ZQH8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nup188Q6ZQH8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nup188Q6ZQH8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Nup188Q6ZQH8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.77■■□□□ 1.4
Nup188Q6ZQH8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Nup188Q6ZQH8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Gm7290-201ENSMUST00000104990 617 ntBASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Gm12918-201ENSMUST00000120234 636 ntBASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Gm15710-201ENSMUST00000121821 636 ntBASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Gm5075-201ENSMUST00000196916 622 ntBASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nup188Q6ZQH8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.75■■□□□ 1.39
Nup188Q6ZQH8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Nup188Q6ZQH8 Gm5408-201ENSMUST00000197998 747 ntBASIC23.75■■□□□ 1.39
Nup188Q6ZQH8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nup188Q6ZQH8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Nup188Q6ZQH8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Nup188Q6ZQH8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms