Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rif1Q6PR54 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.75■□□□□ 0.27
Rif1Q6PR54 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rif1Q6PR54 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.75■□□□□ 0.27
Rif1Q6PR54 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rif1Q6PR54 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rif1Q6PR54 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rif1Q6PR54 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rif1Q6PR54 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rif1Q6PR54 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rif1Q6PR54 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.74■□□□□ 0.27
Rif1Q6PR54 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rif1Q6PR54 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.74■□□□□ 0.27
Rif1Q6PR54 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.74■□□□□ 0.27
Rif1Q6PR54 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rif1Q6PR54 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rif1Q6PR54 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rif1Q6PR54 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rif1Q6PR54 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Rif1Q6PR54 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Rif1Q6PR54 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rif1Q6PR54 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rif1Q6PR54 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.72■□□□□ 0.27
Rif1Q6PR54 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Mir5122-201ENSMUST00000175004 89 ntBASIC16.72■□□□□ 0.27
Rif1Q6PR54 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rif1Q6PR54 Mir1199-201ENSMUST00000117015 119 ntBASIC16.71■□□□□ 0.27
Rif1Q6PR54 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.71■□□□□ 0.27
Rif1Q6PR54 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.71■□□□□ 0.27
Rif1Q6PR54 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rif1Q6PR54 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rif1Q6PR54 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.71■□□□□ 0.27
Rif1Q6PR54 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rif1Q6PR54 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rif1Q6PR54 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rif1Q6PR54 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rif1Q6PR54 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rif1Q6PR54 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Rif1Q6PR54 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rif1Q6PR54 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.7■□□□□ 0.26
Rif1Q6PR54 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Rif1Q6PR54 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.69■□□□□ 0.26
Rif1Q6PR54 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rif1Q6PR54 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rif1Q6PR54 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rif1Q6PR54 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rif1Q6PR54 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rif1Q6PR54 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.69■□□□□ 0.26
Rif1Q6PR54 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.68■□□□□ 0.26
Rif1Q6PR54 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.68■□□□□ 0.26
Rif1Q6PR54 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms