Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rad54bQ6PFE3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rad54bQ6PFE3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.88■□□□□ 0.77
Rad54bQ6PFE3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rad54bQ6PFE3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rad54bQ6PFE3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rad54bQ6PFE3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rad54bQ6PFE3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rad54bQ6PFE3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Rad54bQ6PFE3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.87■□□□□ 0.77
Rad54bQ6PFE3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rad54bQ6PFE3 Gm7417-201ENSMUST00000192950 473 ntBASIC19.87■□□□□ 0.77
Rad54bQ6PFE3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rad54bQ6PFE3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rad54bQ6PFE3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rad54bQ6PFE3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rad54bQ6PFE3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rad54bQ6PFE3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rad54bQ6PFE3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rad54bQ6PFE3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rad54bQ6PFE3 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.86■□□□□ 0.77
Rad54bQ6PFE3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rad54bQ6PFE3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rad54bQ6PFE3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Rad54bQ6PFE3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rad54bQ6PFE3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rad54bQ6PFE3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Gm15820-201ENSMUST00000201566 728 ntBASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.85■□□□□ 0.77
Rad54bQ6PFE3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Rad54bQ6PFE3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rad54bQ6PFE3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rad54bQ6PFE3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rad54bQ6PFE3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.84■□□□□ 0.77
Rad54bQ6PFE3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rad54bQ6PFE3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rad54bQ6PFE3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rad54bQ6PFE3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rad54bQ6PFE3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rad54bQ6PFE3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Rad54bQ6PFE3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rad54bQ6PFE3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rad54bQ6PFE3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rad54bQ6PFE3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rad54bQ6PFE3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rad54bQ6PFE3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rad54bQ6PFE3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rad54bQ6PFE3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rad54bQ6PFE3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rad54bQ6PFE3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.81■□□□□ 0.76
Rad54bQ6PFE3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rad54bQ6PFE3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
Rad54bQ6PFE3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Rad54bQ6PFE3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rad54bQ6PFE3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rad54bQ6PFE3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rad54bQ6PFE3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rad54bQ6PFE3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Gm5812-201ENSMUST00000061073 957 ntBASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad54bQ6PFE3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms