Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Dhx40Q6PE54 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Dhx40Q6PE54 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Dhx40Q6PE54 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Dhx40Q6PE54 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Dhx40Q6PE54 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.94■■□□□ 1.1
Dhx40Q6PE54 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.94■■□□□ 1.1
Dhx40Q6PE54 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Dhx40Q6PE54 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Dhx40Q6PE54 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Dhx40Q6PE54 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Dhx40Q6PE54 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Dhx40Q6PE54 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Dhx40Q6PE54 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
Dhx40Q6PE54 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Dhx40Q6PE54 Mir6236-201ENSMUST00000184437 123 ntBASIC21.93■■□□□ 1.1
Dhx40Q6PE54 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.93■■□□□ 1.1
Dhx40Q6PE54 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.93■■□□□ 1.1
Dhx40Q6PE54 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Dhx40Q6PE54 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Dhx40Q6PE54 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Dhx40Q6PE54 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Dhx40Q6PE54 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Dhx40Q6PE54 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.92■■□□□ 1.1
Dhx40Q6PE54 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Dhx40Q6PE54 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.92■■□□□ 1.1
Dhx40Q6PE54 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Dhx40Q6PE54 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Dhx40Q6PE54 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Dhx40Q6PE54 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Dhx40Q6PE54 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Dhx40Q6PE54 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Dhx40Q6PE54 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Dhx40Q6PE54 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Dhx40Q6PE54 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.91■■□□□ 1.1
Dhx40Q6PE54 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Dhx40Q6PE54 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.9■■□□□ 1.1
Dhx40Q6PE54 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Dhx40Q6PE54 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Dhx40Q6PE54 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Dhx40Q6PE54 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Dhx40Q6PE54 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Dhx40Q6PE54 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Dhx40Q6PE54 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Dhx40Q6PE54 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Dhx40Q6PE54 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Dhx40Q6PE54 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Dhx40Q6PE54 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Dhx40Q6PE54 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Dhx40Q6PE54 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Dhx40Q6PE54 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Dhx40Q6PE54 Gm40881-201ENSMUST00000223397 166 ntBASIC21.88■■□□□ 1.09
Dhx40Q6PE54 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Dhx40Q6PE54 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Dhx40Q6PE54 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Dhx40Q6PE54 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Dhx40Q6PE54 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Dhx40Q6PE54 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.87■■□□□ 1.09
Dhx40Q6PE54 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
Dhx40Q6PE54 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Dhx40Q6PE54 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Dhx40Q6PE54 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Dhx40Q6PE54 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Dhx40Q6PE54 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Dhx40Q6PE54 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Dhx40Q6PE54 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Dhx40Q6PE54 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Dhx40Q6PE54 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Dhx40Q6PE54 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Dhx40Q6PE54 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.86■■□□□ 1.09
Dhx40Q6PE54 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Dhx40Q6PE54 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Dhx40Q6PE54 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Dhx40Q6PE54 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Dhx40Q6PE54 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.85■■□□□ 1.09
Dhx40Q6PE54 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Dhx40Q6PE54 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Dhx40Q6PE54 Gm43530-201ENSMUST00000195920 274 ntBASIC21.85■■□□□ 1.09
Dhx40Q6PE54 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Dhx40Q6PE54 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Dhx40Q6PE54 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Dhx40Q6PE54 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.84■■□□□ 1.09
Dhx40Q6PE54 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Dhx40Q6PE54 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Dhx40Q6PE54 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Dhx40Q6PE54 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Dhx40Q6PE54 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Dhx40Q6PE54 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Dhx40Q6PE54 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms