Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcd3Q6P9Z1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcd3Q6P9Z1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.05■□□□□ 0.48
Smarcd3Q6P9Z1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Smarcd3Q6P9Z1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcd3Q6P9Z1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smarcd3Q6P9Z1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.04■□□□□ 0.48
Smarcd3Q6P9Z1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd3Q6P9Z1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.04■□□□□ 0.48
Smarcd3Q6P9Z1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd3Q6P9Z1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd3Q6P9Z1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd3Q6P9Z1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd3Q6P9Z1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smarcd3Q6P9Z1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Smarcd3Q6P9Z1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Smarcd3Q6P9Z1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.01■□□□□ 0.47
Smarcd3Q6P9Z1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.01■□□□□ 0.47
Smarcd3Q6P9Z1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd3Q6P9Z1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd3Q6P9Z1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd3Q6P9Z1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd3Q6P9Z1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18■□□□□ 0.47
Smarcd3Q6P9Z1 Gm5812-201ENSMUST00000061073 957 ntBASIC18■□□□□ 0.47
Smarcd3Q6P9Z1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd3Q6P9Z1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd3Q6P9Z1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd3Q6P9Z1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18■□□□□ 0.47
Smarcd3Q6P9Z1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Smarcd3Q6P9Z1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd3Q6P9Z1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd3Q6P9Z1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 Mir6236-201ENSMUST00000184437 123 ntBASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd3Q6P9Z1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd3Q6P9Z1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms