Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Best3Q6H1V1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Best3Q6H1V1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Best3Q6H1V1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.66■■□□□ 1.38
Best3Q6H1V1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Best3Q6H1V1 Nespas-201ENSMUST00000143738 1083 ntBASIC23.66■■□□□ 1.38
Best3Q6H1V1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Best3Q6H1V1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Best3Q6H1V1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Best3Q6H1V1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Best3Q6H1V1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Best3Q6H1V1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Best3Q6H1V1 Gm10653-202ENSMUST00000139570 835 ntBASIC23.65■■□□□ 1.38
Best3Q6H1V1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Best3Q6H1V1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Best3Q6H1V1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Best3Q6H1V1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Best3Q6H1V1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Best3Q6H1V1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Best3Q6H1V1 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.64■■□□□ 1.38
Best3Q6H1V1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Best3Q6H1V1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Best3Q6H1V1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Best3Q6H1V1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Best3Q6H1V1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Best3Q6H1V1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.63■■□□□ 1.37
Best3Q6H1V1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Best3Q6H1V1 Gm13148-201ENSMUST00000118892 745 ntBASIC23.63■■□□□ 1.37
Best3Q6H1V1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC23.63■■□□□ 1.37
Best3Q6H1V1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC23.63■■□□□ 1.37
Best3Q6H1V1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Best3Q6H1V1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Best3Q6H1V1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Best3Q6H1V1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
Best3Q6H1V1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Best3Q6H1V1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Best3Q6H1V1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC23.62■■□□□ 1.37
Best3Q6H1V1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Best3Q6H1V1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Best3Q6H1V1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Best3Q6H1V1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Best3Q6H1V1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Best3Q6H1V1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Best3Q6H1V1 Gm7290-201ENSMUST00000104990 617 ntBASIC23.61■■□□□ 1.37
Best3Q6H1V1 Gm12918-201ENSMUST00000120234 636 ntBASIC23.61■■□□□ 1.37
Best3Q6H1V1 Gm15710-201ENSMUST00000121821 636 ntBASIC23.61■■□□□ 1.37
Best3Q6H1V1 Gm38205-201ENSMUST00000192243 258 ntBASIC23.61■■□□□ 1.37
Best3Q6H1V1 Gm5075-201ENSMUST00000196916 622 ntBASIC23.61■■□□□ 1.37
Best3Q6H1V1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Best3Q6H1V1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.61■■□□□ 1.37
Best3Q6H1V1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.61■■□□□ 1.37
Best3Q6H1V1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.61■■□□□ 1.37
Best3Q6H1V1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Best3Q6H1V1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Best3Q6H1V1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Best3Q6H1V1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Best3Q6H1V1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Best3Q6H1V1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
Best3Q6H1V1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Best3Q6H1V1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Best3Q6H1V1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Best3Q6H1V1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.59■■□□□ 1.37
Best3Q6H1V1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
Best3Q6H1V1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Best3Q6H1V1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Best3Q6H1V1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Best3Q6H1V1 Gm12527-201ENSMUST00000117967 564 ntBASIC23.58■■□□□ 1.37
Best3Q6H1V1 Gm13534-201ENSMUST00000121169 513 ntBASIC23.58■■□□□ 1.37
Best3Q6H1V1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Best3Q6H1V1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Best3Q6H1V1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Best3Q6H1V1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Best3Q6H1V1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Best3Q6H1V1 Gm3807-201ENSMUST00000193520 1168 ntBASIC23.58■■□□□ 1.37
Best3Q6H1V1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
Best3Q6H1V1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
Best3Q6H1V1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.58■■□□□ 1.36
Best3Q6H1V1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.58■■□□□ 1.36
Best3Q6H1V1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Best3Q6H1V1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Best3Q6H1V1 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.57■■□□□ 1.36
Best3Q6H1V1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Best3Q6H1V1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Best3Q6H1V1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
Best3Q6H1V1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Best3Q6H1V1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Best3Q6H1V1 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.56■■□□□ 1.36
Best3Q6H1V1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Best3Q6H1V1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Best3Q6H1V1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms