Protein–RNA interactions for Protein: Q64336

Tbr1, T-box brain protein 1, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbr1Q64336 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tbr1Q64336 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tbr1Q64336 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tbr1Q64336 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.84■□□□□ 0.45
Tbr1Q64336 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tbr1Q64336 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tbr1Q64336 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tbr1Q64336 Gm20049-201ENSMUST00000219950 730 ntBASIC17.84■□□□□ 0.45
Tbr1Q64336 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tbr1Q64336 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tbr1Q64336 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tbr1Q64336 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tbr1Q64336 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tbr1Q64336 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tbr1Q64336 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tbr1Q64336 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tbr1Q64336 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.83■□□□□ 0.44
Tbr1Q64336 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.83■□□□□ 0.44
Tbr1Q64336 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tbr1Q64336 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tbr1Q64336 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tbr1Q64336 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tbr1Q64336 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tbr1Q64336 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tbr1Q64336 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tbr1Q64336 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Tbr1Q64336 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Tbr1Q64336 Gm13146-201ENSMUST00000118508 780 ntBASIC17.82■□□□□ 0.44
Tbr1Q64336 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.82■□□□□ 0.44
Tbr1Q64336 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.82■□□□□ 0.44
Tbr1Q64336 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tbr1Q64336 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tbr1Q64336 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.82■□□□□ 0.44
Tbr1Q64336 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tbr1Q64336 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.82■□□□□ 0.44
Tbr1Q64336 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tbr1Q64336 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Tbr1Q64336 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.82■□□□□ 0.44
Tbr1Q64336 Gm10812-201ENSMUST00000099864 546 ntBASIC17.82■□□□□ 0.44
Tbr1Q64336 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tbr1Q64336 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tbr1Q64336 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tbr1Q64336 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.81■□□□□ 0.44
Tbr1Q64336 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.81■□□□□ 0.44
Tbr1Q64336 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.81■□□□□ 0.44
Tbr1Q64336 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.81■□□□□ 0.44
Tbr1Q64336 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Tbr1Q64336 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tbr1Q64336 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.81■□□□□ 0.44
Tbr1Q64336 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.81■□□□□ 0.44
Tbr1Q64336 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tbr1Q64336 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tbr1Q64336 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tbr1Q64336 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tbr1Q64336 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Tbr1Q64336 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tbr1Q64336 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tbr1Q64336 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tbr1Q64336 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Tbr1Q64336 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tbr1Q64336 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tbr1Q64336 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tbr1Q64336 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Tbr1Q64336 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tbr1Q64336 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tbr1Q64336 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.79■□□□□ 0.44
Tbr1Q64336 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tbr1Q64336 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tbr1Q64336 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tbr1Q64336 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tbr1Q64336 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tbr1Q64336 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tbr1Q64336 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tbr1Q64336 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tbr1Q64336 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tbr1Q64336 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tbr1Q64336 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tbr1Q64336 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tbr1Q64336 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tbr1Q64336 Gm6420-201ENSMUST00000193885 723 ntBASIC17.78■□□□□ 0.44
Tbr1Q64336 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Tbr1Q64336 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tbr1Q64336 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tbr1Q64336 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tbr1Q64336 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tbr1Q64336 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tbr1Q64336 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tbr1Q64336 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tbr1Q64336 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tbr1Q64336 Gm37856-201ENSMUST00000191634 999 ntBASIC17.77■□□□□ 0.44
Tbr1Q64336 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tbr1Q64336 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tbr1Q64336 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tbr1Q64336 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Tbr1Q64336 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tbr1Q64336 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tbr1Q64336 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Tbr1Q64336 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tbr1Q64336 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tbr1Q64336 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms