Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ndufa4Q62425 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndufa4Q62425 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndufa4Q62425 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ndufa4Q62425 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ndufa4Q62425 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndufa4Q62425 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndufa4Q62425 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndufa4Q62425 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndufa4Q62425 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ndufa4Q62425 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndufa4Q62425 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ndufa4Q62425 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ndufa4Q62425 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Ndufa4Q62425 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndufa4Q62425 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndufa4Q62425 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.27□□□□□ -0.13
Ndufa4Q62425 Gm27502-201ENSMUST00000183495 199 ntBASIC14.27□□□□□ -0.13
Ndufa4Q62425 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndufa4Q62425 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndufa4Q62425 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndufa4Q62425 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ndufa4Q62425 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ndufa4Q62425 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndufa4Q62425 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ndufa4Q62425 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndufa4Q62425 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndufa4Q62425 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Ndufa4Q62425 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Gm7332-201ENSMUST00000118351 454 ntBASIC14.26□□□□□ -0.13
Ndufa4Q62425 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ndufa4Q62425 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Golph3-205ENSMUST00000228671 2842 ntBASIC14.26□□□□□ -0.13
Ndufa4Q62425 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndufa4Q62425 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufa4Q62425 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufa4Q62425 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.25□□□□□ -0.13
Ndufa4Q62425 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufa4Q62425 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufa4Q62425 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.23□□□□□ -0.13
Ndufa4Q62425 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufa4Q62425 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufa4Q62425 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms