Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
AtmQ62388 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AtmQ62388 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.98■□□□□ 0.63
AtmQ62388 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AtmQ62388 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
AtmQ62388 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.97■□□□□ 0.63
AtmQ62388 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AtmQ62388 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AtmQ62388 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.97■□□□□ 0.63
AtmQ62388 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AtmQ62388 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
AtmQ62388 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
AtmQ62388 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
AtmQ62388 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
AtmQ62388 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AtmQ62388 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AtmQ62388 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AtmQ62388 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.96■□□□□ 0.63
AtmQ62388 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AtmQ62388 Trmt13-210ENSMUST00000198454 880 ntBASIC18.96■□□□□ 0.63
AtmQ62388 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.96■□□□□ 0.63
AtmQ62388 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AtmQ62388 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AtmQ62388 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.96■□□□□ 0.63
AtmQ62388 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AtmQ62388 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AtmQ62388 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
AtmQ62388 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AtmQ62388 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.95■□□□□ 0.62
AtmQ62388 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AtmQ62388 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AtmQ62388 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.95■□□□□ 0.62
AtmQ62388 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AtmQ62388 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AtmQ62388 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
AtmQ62388 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AtmQ62388 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AtmQ62388 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
AtmQ62388 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AtmQ62388 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AtmQ62388 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
AtmQ62388 Gm6365-201ENSMUST00000054711 744 ntBASIC18.94■□□□□ 0.62
AtmQ62388 Gm10819-201ENSMUST00000099988 561 ntBASIC18.94■□□□□ 0.62
AtmQ62388 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AtmQ62388 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AtmQ62388 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
AtmQ62388 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AtmQ62388 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.93■□□□□ 0.62
AtmQ62388 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
AtmQ62388 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
AtmQ62388 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AtmQ62388 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
AtmQ62388 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.93■□□□□ 0.62
AtmQ62388 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AtmQ62388 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AtmQ62388 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AtmQ62388 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AtmQ62388 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.92■□□□□ 0.62
AtmQ62388 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AtmQ62388 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AtmQ62388 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
AtmQ62388 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AtmQ62388 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.92■□□□□ 0.62
AtmQ62388 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AtmQ62388 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AtmQ62388 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AtmQ62388 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
AtmQ62388 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.91■□□□□ 0.62
AtmQ62388 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
AtmQ62388 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
AtmQ62388 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
AtmQ62388 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
AtmQ62388 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
AtmQ62388 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
AtmQ62388 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
AtmQ62388 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.9■□□□□ 0.62
AtmQ62388 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AtmQ62388 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
AtmQ62388 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
AtmQ62388 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
AtmQ62388 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.89■□□□□ 0.61
AtmQ62388 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.89■□□□□ 0.61
AtmQ62388 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AtmQ62388 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AtmQ62388 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AtmQ62388 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AtmQ62388 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.89■□□□□ 0.61
AtmQ62388 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.89■□□□□ 0.61
AtmQ62388 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AtmQ62388 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms