Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Scn9aQ62205 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn9aQ62205 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn9aQ62205 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scn9aQ62205 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Scn9aQ62205 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scn9aQ62205 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.7■■□□□ 1.38
Scn9aQ62205 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn9aQ62205 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn9aQ62205 Gm7290-201ENSMUST00000104990 617 ntBASIC23.69■■□□□ 1.38
Scn9aQ62205 Gm12918-201ENSMUST00000120234 636 ntBASIC23.69■■□□□ 1.38
Scn9aQ62205 Gm15710-201ENSMUST00000121821 636 ntBASIC23.69■■□□□ 1.38
Scn9aQ62205 Gm5075-201ENSMUST00000196916 622 ntBASIC23.69■■□□□ 1.38
Scn9aQ62205 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.69■■□□□ 1.38
Scn9aQ62205 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.69■■□□□ 1.38
Scn9aQ62205 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Scn9aQ62205 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.69■■□□□ 1.38
Scn9aQ62205 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.69■■□□□ 1.38
Scn9aQ62205 Gm20049-201ENSMUST00000219950 730 ntBASIC23.69■■□□□ 1.38
Scn9aQ62205 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.69■■□□□ 1.38
Scn9aQ62205 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn9aQ62205 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn9aQ62205 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn9aQ62205 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn9aQ62205 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn9aQ62205 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.68■■□□□ 1.38
Scn9aQ62205 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.68■■□□□ 1.38
Scn9aQ62205 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn9aQ62205 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn9aQ62205 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scn9aQ62205 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Scn9aQ62205 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.67■■□□□ 1.38
Scn9aQ62205 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Scn9aQ62205 Gm5408-201ENSMUST00000197998 747 ntBASIC23.67■■□□□ 1.38
Scn9aQ62205 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.67■■□□□ 1.38
Scn9aQ62205 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scn9aQ62205 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Scn9aQ62205 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scn9aQ62205 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scn9aQ62205 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
Scn9aQ62205 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scn9aQ62205 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Scn9aQ62205 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Scn9aQ62205 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Scn9aQ62205 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scn9aQ62205 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scn9aQ62205 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.65■■□□□ 1.38
Scn9aQ62205 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.65■■□□□ 1.38
Scn9aQ62205 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scn9aQ62205 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scn9aQ62205 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scn9aQ62205 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scn9aQ62205 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scn9aQ62205 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Scn9aQ62205 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.64■■□□□ 1.37
Scn9aQ62205 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Scn9aQ62205 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.63■■□□□ 1.37
Scn9aQ62205 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.63■■□□□ 1.37
Scn9aQ62205 Gm6211-202ENSMUST00000167849 925 ntBASIC23.63■■□□□ 1.37
Scn9aQ62205 Gm37856-201ENSMUST00000191634 999 ntBASIC23.63■■□□□ 1.37
Scn9aQ62205 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Scn9aQ62205 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.63■■□□□ 1.37
Scn9aQ62205 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Scn9aQ62205 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Scn9aQ62205 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn9aQ62205 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn9aQ62205 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scn9aQ62205 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.62■■□□□ 1.37
Scn9aQ62205 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.62■■□□□ 1.37
Scn9aQ62205 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Scn9aQ62205 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Scn9aQ62205 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scn9aQ62205 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Scn9aQ62205 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scn9aQ62205 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Scn9aQ62205 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.61■■□□□ 1.37
Scn9aQ62205 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.61■■□□□ 1.37
Scn9aQ62205 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scn9aQ62205 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.61■■□□□ 1.37
Scn9aQ62205 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Scn9aQ62205 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scn9aQ62205 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Scn9aQ62205 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC23.61■■□□□ 1.37
Scn9aQ62205 AC158538.1-201ENSMUST00000225870 294 ntBASIC23.61■■□□□ 1.37
Scn9aQ62205 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.61■■□□□ 1.37
Scn9aQ62205 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scn9aQ62205 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scn9aQ62205 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Scn9aQ62205 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Scn9aQ62205 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scn9aQ62205 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scn9aQ62205 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scn9aQ62205 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.6■■□□□ 1.37
Scn9aQ62205 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scn9aQ62205 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scn9aQ62205 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scn9aQ62205 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scn9aQ62205 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scn9aQ62205 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.59■■□□□ 1.37
Scn9aQ62205 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms