Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Runx1t1Q61909 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Runx1t1Q61909 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Runx1t1Q61909 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Runx1t1Q61909 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.77■□□□□ 0.6
Runx1t1Q61909 Gm45102-201ENSMUST00000207427 857 ntBASIC18.77■□□□□ 0.6
Runx1t1Q61909 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.77■□□□□ 0.6
Runx1t1Q61909 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Runx1t1Q61909 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Runx1t1Q61909 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Runx1t1Q61909 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Runx1t1Q61909 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Runx1t1Q61909 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Runx1t1Q61909 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Runx1t1Q61909 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Runx1t1Q61909 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Runx1t1Q61909 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Runx1t1Q61909 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.76■□□□□ 0.59
Runx1t1Q61909 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.76■□□□□ 0.59
Runx1t1Q61909 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.76■□□□□ 0.59
Runx1t1Q61909 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.76■□□□□ 0.59
Runx1t1Q61909 Rps24-207ENSMUST00000224568 714 ntBASIC18.76■□□□□ 0.59
Runx1t1Q61909 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Runx1t1Q61909 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Runx1t1Q61909 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Runx1t1Q61909 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Runx1t1Q61909 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Runx1t1Q61909 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Runx1t1Q61909 Gm22238-201ENSMUST00000175222 88 ntBASIC18.75■□□□□ 0.59
Runx1t1Q61909 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Runx1t1Q61909 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.75■□□□□ 0.59
Runx1t1Q61909 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Runx1t1Q61909 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.74■□□□□ 0.59
Runx1t1Q61909 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Gm9870-201ENSMUST00000063874 645 ntBASIC18.74■□□□□ 0.59
Runx1t1Q61909 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Runx1t1Q61909 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Runx1t1Q61909 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Runx1t1Q61909 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Runx1t1Q61909 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Runx1t1Q61909 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Runx1t1Q61909 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Runx1t1Q61909 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Runx1t1Q61909 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Runx1t1Q61909 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Runx1t1Q61909 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.73■□□□□ 0.59
Runx1t1Q61909 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Runx1t1Q61909 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Runx1t1Q61909 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Runx1t1Q61909 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Runx1t1Q61909 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Runx1t1Q61909 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.72■□□□□ 0.59
Runx1t1Q61909 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.72■□□□□ 0.59
Runx1t1Q61909 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Runx1t1Q61909 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Runx1t1Q61909 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Runx1t1Q61909 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Runx1t1Q61909 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Runx1t1Q61909 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Runx1t1Q61909 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Runx1t1Q61909 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Runx1t1Q61909 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Runx1t1Q61909 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
Runx1t1Q61909 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.71■□□□□ 0.59
Runx1t1Q61909 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Runx1t1Q61909 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Runx1t1Q61909 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.71■□□□□ 0.59
Runx1t1Q61909 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Runx1t1Q61909 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Runx1t1Q61909 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Runx1t1Q61909 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.7■□□□□ 0.58
Runx1t1Q61909 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Runx1t1Q61909 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Runx1t1Q61909 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.69■□□□□ 0.58
Runx1t1Q61909 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Runx1t1Q61909 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms