Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf4Q61382 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Traf4Q61382 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.33■□□□□ 0.36
Traf4Q61382 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.33■□□□□ 0.36
Traf4Q61382 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.33■□□□□ 0.36
Traf4Q61382 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf4Q61382 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf4Q61382 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf4Q61382 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Traf4Q61382 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Traf4Q61382 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.32■□□□□ 0.36
Traf4Q61382 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Traf4Q61382 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf4Q61382 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf4Q61382 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.32■□□□□ 0.36
Traf4Q61382 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.32■□□□□ 0.36
Traf4Q61382 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Traf4Q61382 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Traf4Q61382 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Traf4Q61382 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Traf4Q61382 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Traf4Q61382 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.31■□□□□ 0.36
Traf4Q61382 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf4Q61382 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Traf4Q61382 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Traf4Q61382 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Traf4Q61382 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Traf4Q61382 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Traf4Q61382 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.3■□□□□ 0.36
Traf4Q61382 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Traf4Q61382 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Traf4Q61382 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Traf4Q61382 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.3■□□□□ 0.36
Traf4Q61382 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Traf4Q61382 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Traf4Q61382 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Traf4Q61382 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Traf4Q61382 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Traf4Q61382 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Traf4Q61382 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.29■□□□□ 0.36
Traf4Q61382 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
Traf4Q61382 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Traf4Q61382 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Traf4Q61382 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Traf4Q61382 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.28■□□□□ 0.36
Traf4Q61382 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Traf4Q61382 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Traf4Q61382 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Traf4Q61382 Gm8493-201ENSMUST00000196881 489 ntBASIC17.28■□□□□ 0.36
Traf4Q61382 Gm43017-201ENSMUST00000198296 752 ntBASIC17.28■□□□□ 0.36
Traf4Q61382 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Traf4Q61382 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.28■□□□□ 0.36
Traf4Q61382 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.28■□□□□ 0.36
Traf4Q61382 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Traf4Q61382 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Traf4Q61382 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Traf4Q61382 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Traf4Q61382 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Traf4Q61382 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Traf4Q61382 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Traf4Q61382 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Traf4Q61382 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Traf4Q61382 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Traf4Q61382 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Traf4Q61382 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Traf4Q61382 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Traf4Q61382 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Traf4Q61382 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Traf4Q61382 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Traf4Q61382 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Traf4Q61382 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Traf4Q61382 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Traf4Q61382 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Traf4Q61382 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Traf4Q61382 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Traf4Q61382 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Traf4Q61382 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.26■□□□□ 0.35
Traf4Q61382 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.26■□□□□ 0.35
Traf4Q61382 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms