Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1eQ61290 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1eQ61290 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1eQ61290 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.59■□□□□ 0.73
Cacna1eQ61290 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1eQ61290 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1eQ61290 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1eQ61290 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1eQ61290 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1eQ61290 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1eQ61290 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Cacna1eQ61290 Gm12441-201ENSMUST00000121806 588 ntBASIC19.59■□□□□ 0.73
Cacna1eQ61290 Gm13146-201ENSMUST00000118508 780 ntBASIC19.58■□□□□ 0.73
Cacna1eQ61290 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1eQ61290 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1eQ61290 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1eQ61290 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1eQ61290 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1eQ61290 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cacna1eQ61290 Nespas-201ENSMUST00000143738 1083 ntBASIC19.58■□□□□ 0.72
Cacna1eQ61290 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1eQ61290 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1eQ61290 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1eQ61290 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.57■□□□□ 0.72
Cacna1eQ61290 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1eQ61290 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.57■□□□□ 0.72
Cacna1eQ61290 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1eQ61290 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.56■□□□□ 0.72
Cacna1eQ61290 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.56■□□□□ 0.72
Cacna1eQ61290 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1eQ61290 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.56■□□□□ 0.72
Cacna1eQ61290 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1eQ61290 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.56■□□□□ 0.72
Cacna1eQ61290 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cacna1eQ61290 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.55■□□□□ 0.72
Cacna1eQ61290 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cacna1eQ61290 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1eQ61290 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1eQ61290 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1eQ61290 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1eQ61290 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cacna1eQ61290 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1eQ61290 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1eQ61290 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.54■□□□□ 0.72
Cacna1eQ61290 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1eQ61290 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1eQ61290 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1eQ61290 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.53■□□□□ 0.72
Cacna1eQ61290 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1eQ61290 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1eQ61290 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cacna1eQ61290 Mir5133-201ENSMUST00000174955 77 ntBASIC19.53■□□□□ 0.72
Cacna1eQ61290 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.53■□□□□ 0.72
Cacna1eQ61290 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1eQ61290 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cacna1eQ61290 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1eQ61290 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1eQ61290 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1eQ61290 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1eQ61290 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.52■□□□□ 0.72
Cacna1eQ61290 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1eQ61290 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.52■□□□□ 0.72
Cacna1eQ61290 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1eQ61290 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacna1eQ61290 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.51■□□□□ 0.71
Cacna1eQ61290 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1eQ61290 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1eQ61290 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1eQ61290 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1eQ61290 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1eQ61290 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Cacna1eQ61290 Gm6211-202ENSMUST00000167849 925 ntBASIC19.5■□□□□ 0.71
Cacna1eQ61290 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.5■□□□□ 0.71
Cacna1eQ61290 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1eQ61290 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1eQ61290 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.5■□□□□ 0.71
Cacna1eQ61290 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.5■□□□□ 0.71
Cacna1eQ61290 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1eQ61290 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.49■□□□□ 0.71
Cacna1eQ61290 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms