Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scarb1Q61009 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Scarb1Q61009 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scarb1Q61009 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scarb1Q61009 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scarb1Q61009 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scarb1Q61009 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Scarb1Q61009 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.56■□□□□ 0.24
Scarb1Q61009 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scarb1Q61009 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Scarb1Q61009 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scarb1Q61009 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scarb1Q61009 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.55■□□□□ 0.24
Scarb1Q61009 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.55■□□□□ 0.24
Scarb1Q61009 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Scarb1Q61009 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.55■□□□□ 0.24
Scarb1Q61009 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scarb1Q61009 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.54■□□□□ 0.24
Scarb1Q61009 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scarb1Q61009 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.54■□□□□ 0.24
Scarb1Q61009 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.54■□□□□ 0.24
Scarb1Q61009 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scarb1Q61009 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scarb1Q61009 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.53■□□□□ 0.24
Scarb1Q61009 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.53■□□□□ 0.24
Scarb1Q61009 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scarb1Q61009 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.53■□□□□ 0.24
Scarb1Q61009 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Scarb1Q61009 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scarb1Q61009 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scarb1Q61009 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scarb1Q61009 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scarb1Q61009 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scarb1Q61009 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scarb1Q61009 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Scarb1Q61009 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scarb1Q61009 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.52■□□□□ 0.24
Scarb1Q61009 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scarb1Q61009 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Scarb1Q61009 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scarb1Q61009 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Scarb1Q61009 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Scarb1Q61009 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Scarb1Q61009 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scarb1Q61009 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scarb1Q61009 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scarb1Q61009 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scarb1Q61009 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.51■□□□□ 0.23
Scarb1Q61009 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.51■□□□□ 0.23
Scarb1Q61009 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scarb1Q61009 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scarb1Q61009 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Scarb1Q61009 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scarb1Q61009 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.51■□□□□ 0.23
Scarb1Q61009 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scarb1Q61009 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scarb1Q61009 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Scarb1Q61009 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Scarb1Q61009 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.5■□□□□ 0.23
Scarb1Q61009 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scarb1Q61009 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scarb1Q61009 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.5■□□□□ 0.23
Scarb1Q61009 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scarb1Q61009 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scarb1Q61009 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.5■□□□□ 0.23
Scarb1Q61009 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scarb1Q61009 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scarb1Q61009 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms