Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col12a1Q60847 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col12a1Q60847 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col12a1Q60847 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col12a1Q60847 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.9■□□□□ 0.78
Col12a1Q60847 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col12a1Q60847 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.9■□□□□ 0.78
Col12a1Q60847 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col12a1Q60847 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col12a1Q60847 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col12a1Q60847 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Col12a1Q60847 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col12a1Q60847 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Col12a1Q60847 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col12a1Q60847 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.89■□□□□ 0.78
Col12a1Q60847 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.89■□□□□ 0.78
Col12a1Q60847 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.89■□□□□ 0.78
Col12a1Q60847 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col12a1Q60847 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col12a1Q60847 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col12a1Q60847 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col12a1Q60847 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col12a1Q60847 Gm6420-201ENSMUST00000193885 723 ntBASIC19.89■□□□□ 0.77
Col12a1Q60847 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.89■□□□□ 0.77
Col12a1Q60847 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col12a1Q60847 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col12a1Q60847 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col12a1Q60847 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Col12a1Q60847 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.88■□□□□ 0.77
Col12a1Q60847 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col12a1Q60847 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col12a1Q60847 Gm10819-201ENSMUST00000099988 561 ntBASIC19.88■□□□□ 0.77
Col12a1Q60847 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col12a1Q60847 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col12a1Q60847 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.87■□□□□ 0.77
Col12a1Q60847 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col12a1Q60847 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Col12a1Q60847 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col12a1Q60847 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col12a1Q60847 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col12a1Q60847 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col12a1Q60847 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col12a1Q60847 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col12a1Q60847 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col12a1Q60847 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col12a1Q60847 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.85■□□□□ 0.77
Col12a1Q60847 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col12a1Q60847 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col12a1Q60847 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col12a1Q60847 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col12a1Q60847 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.85■□□□□ 0.77
Col12a1Q60847 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.85■□□□□ 0.77
Col12a1Q60847 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.85■□□□□ 0.77
Col12a1Q60847 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col12a1Q60847 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col12a1Q60847 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col12a1Q60847 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col12a1Q60847 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col12a1Q60847 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col12a1Q60847 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col12a1Q60847 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.84■□□□□ 0.77
Col12a1Q60847 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col12a1Q60847 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col12a1Q60847 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col12a1Q60847 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col12a1Q60847 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col12a1Q60847 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Col12a1Q60847 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Col12a1Q60847 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col12a1Q60847 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col12a1Q60847 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col12a1Q60847 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col12a1Q60847 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col12a1Q60847 Gm6211-202ENSMUST00000167849 925 ntBASIC19.82■□□□□ 0.76
Col12a1Q60847 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col12a1Q60847 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col12a1Q60847 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.82■□□□□ 0.76
Col12a1Q60847 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col12a1Q60847 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col12a1Q60847 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col12a1Q60847 Gm13146-201ENSMUST00000118508 780 ntBASIC19.82■□□□□ 0.76
Col12a1Q60847 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col12a1Q60847 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col12a1Q60847 Gm5643-201ENSMUST00000117081 966 ntBASIC19.81■□□□□ 0.76
Col12a1Q60847 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col12a1Q60847 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col12a1Q60847 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col12a1Q60847 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.81■□□□□ 0.76
Col12a1Q60847 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col12a1Q60847 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col12a1Q60847 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col12a1Q60847 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col12a1Q60847 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.8■□□□□ 0.76
Col12a1Q60847 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col12a1Q60847 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col12a1Q60847 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col12a1Q60847 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.8■□□□□ 0.76
Col12a1Q60847 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col12a1Q60847 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col12a1Q60847 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms