Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip3Q60769 Smad6-203ENSMUST00000179458 273 ntBASIC18.54■□□□□ 0.56
Tnfaip3Q60769 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip3Q60769 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip3Q60769 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip3Q60769 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip3Q60769 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip3Q60769 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.54■□□□□ 0.56
Tnfaip3Q60769 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfaip3Q60769 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfaip3Q60769 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfaip3Q60769 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.52■□□□□ 0.56
Tnfaip3Q60769 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.52■□□□□ 0.56
Tnfaip3Q60769 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Tnfaip3Q60769 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfaip3Q60769 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.52■□□□□ 0.56
Tnfaip3Q60769 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfaip3Q60769 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfaip3Q60769 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfaip3Q60769 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfaip3Q60769 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfaip3Q60769 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfaip3Q60769 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip3Q60769 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip3Q60769 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip3Q60769 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip3Q60769 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip3Q60769 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip3Q60769 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Gm43060-201ENSMUST00000200621 289 ntBASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Tnfaip3Q60769 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip3Q60769 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Tnfaip3Q60769 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip3Q60769 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip3Q60769 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip3Q60769 Gm40848-201ENSMUST00000221998 324 ntBASIC18.46■□□□□ 0.55
Tnfaip3Q60769 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tnfaip3Q60769 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip3Q60769 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip3Q60769 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tnfaip3Q60769 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms