Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Cacna2d4Q5RJF7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
Cacna2d4Q5RJF7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacna2d4Q5RJF7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacna2d4Q5RJF7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacna2d4Q5RJF7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.92■■□□□ 1.1
Cacna2d4Q5RJF7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.92■■□□□ 1.1
Cacna2d4Q5RJF7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacna2d4Q5RJF7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.92■■□□□ 1.1
Cacna2d4Q5RJF7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacna2d4Q5RJF7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.91■■□□□ 1.1
Cacna2d4Q5RJF7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Cacna2d4Q5RJF7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cacna2d4Q5RJF7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacna2d4Q5RJF7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacna2d4Q5RJF7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacna2d4Q5RJF7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Cacna2d4Q5RJF7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.91■■□□□ 1.1
Cacna2d4Q5RJF7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacna2d4Q5RJF7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna2d4Q5RJF7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cacna2d4Q5RJF7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cacna2d4Q5RJF7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cacna2d4Q5RJF7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna2d4Q5RJF7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna2d4Q5RJF7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna2d4Q5RJF7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna2d4Q5RJF7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Cacna2d4Q5RJF7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna2d4Q5RJF7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna2d4Q5RJF7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna2d4Q5RJF7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna2d4Q5RJF7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna2d4Q5RJF7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Gm45417-201ENSMUST00000209533 758 ntBASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna2d4Q5RJF7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Cacna2d4Q5RJF7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Cacna2d4Q5RJF7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cacna2d4Q5RJF7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Mir7075-201ENSMUST00000184187 82 ntBASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna2d4Q5RJF7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna2d4Q5RJF7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
Cacna2d4Q5RJF7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Cacna2d4Q5RJF7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna2d4Q5RJF7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna2d4Q5RJF7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna2d4Q5RJF7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna2d4Q5RJF7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms