Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-2Q5R1I4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-2Q5R1I4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trav6-2Q5R1I4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-2Q5R1I4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-2Q5R1I4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-2Q5R1I4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-2Q5R1I4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-2Q5R1I4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-2Q5R1I4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-2Q5R1I4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-2Q5R1I4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-2Q5R1I4 Gm10602-201ENSMUST00000098239 609 ntBASIC17.39■□□□□ 0.37
Trav6-2Q5R1I4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-2Q5R1I4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-2Q5R1I4 Reep4-203ENSMUST00000226563 1444 ntBASIC17.38■□□□□ 0.37
Trav6-2Q5R1I4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-2Q5R1I4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-2Q5R1I4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.38■□□□□ 0.37
Trav6-2Q5R1I4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.38■□□□□ 0.37
Trav6-2Q5R1I4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-2Q5R1I4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-2Q5R1I4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-2Q5R1I4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-2Q5R1I4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-2Q5R1I4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Trav6-2Q5R1I4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trav6-2Q5R1I4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav6-2Q5R1I4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav6-2Q5R1I4 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.34■□□□□ 0.37
Trav6-2Q5R1I4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.34■□□□□ 0.37
Trav6-2Q5R1I4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-2Q5R1I4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Trav6-2Q5R1I4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-2Q5R1I4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-2Q5R1I4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-2Q5R1I4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-2Q5R1I4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trav6-2Q5R1I4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trav6-2Q5R1I4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.33■□□□□ 0.36
Trav6-2Q5R1I4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-2Q5R1I4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-2Q5R1I4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-2Q5R1I4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-2Q5R1I4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-2Q5R1I4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms