Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav7d-3Q5R1I1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav7d-3Q5R1I1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Trav7d-3Q5R1I1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav7d-3Q5R1I1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-3Q5R1I1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-3Q5R1I1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Gm7417-201ENSMUST00000192950 473 ntBASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-3Q5R1I1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Mir6236-201ENSMUST00000184437 123 ntBASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-3Q5R1I1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Gm9870-201ENSMUST00000063874 645 ntBASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-3Q5R1I1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-3Q5R1I1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-3Q5R1I1 Gm5812-201ENSMUST00000061073 957 ntBASIC14.4□□□□□ -0.1
Trav7d-3Q5R1I1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav7d-3Q5R1I1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-3Q5R1I1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-3Q5R1I1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-3Q5R1I1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-3Q5R1I1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
Trav7d-3Q5R1I1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms