Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-3Q5R1C3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-3Q5R1C3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Trav3-3Q5R1C3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav3-3Q5R1C3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-3Q5R1C3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav3-3Q5R1C3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav3-3Q5R1C3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav3-3Q5R1C3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav3-3Q5R1C3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-3Q5R1C3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms