Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav8d-2Q5R1B6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.38■□□□□ 0.69
Trav8d-2Q5R1B6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.38■□□□□ 0.69
Trav8d-2Q5R1B6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trav8d-2Q5R1B6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.38■□□□□ 0.69
Trav8d-2Q5R1B6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Gm20049-201ENSMUST00000219950 730 ntBASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-2Q5R1B6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Gm10812-201ENSMUST00000099864 546 ntBASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8d-2Q5R1B6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 Mir7071-201ENSMUST00000184847 69 ntBASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-2Q5R1B6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Gm22325-201ENSMUST00000158904 308 ntBASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Gm6420-201ENSMUST00000193885 723 ntBASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav8d-2Q5R1B6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trav8d-2Q5R1B6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav8d-2Q5R1B6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav8d-2Q5R1B6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav8d-2Q5R1B6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8d-2Q5R1B6 Gm6211-202ENSMUST00000167849 925 ntBASIC19.33■□□□□ 0.68
Trav8d-2Q5R1B6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8d-2Q5R1B6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8d-2Q5R1B6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trav8d-2Q5R1B6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8d-2Q5R1B6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8d-2Q5R1B6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Gm38205-201ENSMUST00000192243 258 ntBASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-2Q5R1B6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav8d-2Q5R1B6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav8d-2Q5R1B6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.31■□□□□ 0.68
Trav8d-2Q5R1B6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav8d-2Q5R1B6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav8d-2Q5R1B6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav8d-2Q5R1B6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav8d-2Q5R1B6 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.31■□□□□ 0.68
Trav8d-2Q5R1B6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav8d-2Q5R1B6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav8d-2Q5R1B6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav8d-2Q5R1B6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.3■□□□□ 0.68
Trav8d-2Q5R1B6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav8d-2Q5R1B6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.3■□□□□ 0.68
Trav8d-2Q5R1B6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.3■□□□□ 0.68
Trav8d-2Q5R1B6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav8d-2Q5R1B6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms