Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps13aQ5H8C4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vps13aQ5H8C4 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.93■□□□□ 0.78
Vps13aQ5H8C4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Vps13aQ5H8C4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vps13aQ5H8C4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.93■□□□□ 0.78
Vps13aQ5H8C4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.93■□□□□ 0.78
Vps13aQ5H8C4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps13aQ5H8C4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps13aQ5H8C4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Gm7290-201ENSMUST00000104990 617 ntBASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Gm12918-201ENSMUST00000120234 636 ntBASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Gm15710-201ENSMUST00000121821 636 ntBASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Gm5075-201ENSMUST00000196916 622 ntBASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.91■□□□□ 0.78
Vps13aQ5H8C4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps13aQ5H8C4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vps13aQ5H8C4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps13aQ5H8C4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Vps13aQ5H8C4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Vps13aQ5H8C4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Vps13aQ5H8C4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Vps13aQ5H8C4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps13aQ5H8C4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.89■□□□□ 0.77
Vps13aQ5H8C4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps13aQ5H8C4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.89■□□□□ 0.77
Vps13aQ5H8C4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps13aQ5H8C4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps13aQ5H8C4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps13aQ5H8C4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps13aQ5H8C4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Vps13aQ5H8C4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.88■□□□□ 0.77
Vps13aQ5H8C4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Vps13aQ5H8C4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps13aQ5H8C4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Vps13aQ5H8C4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps13aQ5H8C4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps13aQ5H8C4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Vps13aQ5H8C4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps13aQ5H8C4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps13aQ5H8C4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Vps13aQ5H8C4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps13aQ5H8C4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps13aQ5H8C4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps13aQ5H8C4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps13aQ5H8C4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps13aQ5H8C4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vps13aQ5H8C4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Vps13aQ5H8C4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vps13aQ5H8C4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps13aQ5H8C4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps13aQ5H8C4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.85■□□□□ 0.77
Vps13aQ5H8C4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.85■□□□□ 0.77
Vps13aQ5H8C4 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.85■□□□□ 0.77
Vps13aQ5H8C4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.84■□□□□ 0.77
Vps13aQ5H8C4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps13aQ5H8C4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.84■□□□□ 0.77
Vps13aQ5H8C4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps13aQ5H8C4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps13aQ5H8C4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps13aQ5H8C4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps13aQ5H8C4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps13aQ5H8C4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms