Protein–RNA interactions for Protein: Q3UWQ3

Ube2fb, NEDD8-conjugating enzyme UBE2F-B, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fbQ3UWQ3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ube2fbQ3UWQ3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ube2fbQ3UWQ3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ube2fbQ3UWQ3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube2fbQ3UWQ3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.33■□□□□ 0.52
Ube2fbQ3UWQ3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.33■□□□□ 0.52
Ube2fbQ3UWQ3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ube2fbQ3UWQ3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.33■□□□□ 0.52
Ube2fbQ3UWQ3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ube2fbQ3UWQ3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube2fbQ3UWQ3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube2fbQ3UWQ3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.33■□□□□ 0.52
Ube2fbQ3UWQ3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube2fbQ3UWQ3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 Gm27405-201ENSMUST00000184201 112 ntBASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 Gm42642-201ENSMUST00000200683 355 ntBASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ube2fbQ3UWQ3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.31■□□□□ 0.52
Ube2fbQ3UWQ3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Gm26571-201ENSMUST00000181399 666 ntBASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2fbQ3UWQ3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ube2fbQ3UWQ3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube2fbQ3UWQ3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ube2fbQ3UWQ3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ube2fbQ3UWQ3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube2fbQ3UWQ3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube2fbQ3UWQ3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube2fbQ3UWQ3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.27■□□□□ 0.52
Ube2fbQ3UWQ3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube2fbQ3UWQ3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube2fbQ3UWQ3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.27■□□□□ 0.52
Ube2fbQ3UWQ3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ube2fbQ3UWQ3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ube2fbQ3UWQ3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.27■□□□□ 0.52
Ube2fbQ3UWQ3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.27■□□□□ 0.52
Ube2fbQ3UWQ3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms