Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.2■□□□□ 0.98
Smcr8Q3UMB5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smcr8Q3UMB5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smcr8Q3UMB5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smcr8Q3UMB5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smcr8Q3UMB5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smcr8Q3UMB5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smcr8Q3UMB5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smcr8Q3UMB5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smcr8Q3UMB5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smcr8Q3UMB5 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.17■□□□□ 0.98
Smcr8Q3UMB5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Smcr8Q3UMB5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smcr8Q3UMB5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smcr8Q3UMB5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smcr8Q3UMB5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smcr8Q3UMB5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smcr8Q3UMB5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smcr8Q3UMB5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smcr8Q3UMB5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smcr8Q3UMB5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.16■□□□□ 0.98
Smcr8Q3UMB5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smcr8Q3UMB5 Gm42642-201ENSMUST00000200683 355 ntBASIC21.16■□□□□ 0.98
Smcr8Q3UMB5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smcr8Q3UMB5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.15■□□□□ 0.98
Smcr8Q3UMB5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Smcr8Q3UMB5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.15■□□□□ 0.98
Smcr8Q3UMB5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smcr8Q3UMB5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smcr8Q3UMB5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smcr8Q3UMB5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smcr8Q3UMB5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smcr8Q3UMB5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 Gm26571-201ENSMUST00000181399 666 ntBASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 Gm42569-201ENSMUST00000200539 472 ntBASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smcr8Q3UMB5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smcr8Q3UMB5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smcr8Q3UMB5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smcr8Q3UMB5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smcr8Q3UMB5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smcr8Q3UMB5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smcr8Q3UMB5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smcr8Q3UMB5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smcr8Q3UMB5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smcr8Q3UMB5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smcr8Q3UMB5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smcr8Q3UMB5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smcr8Q3UMB5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Gm7291-201ENSMUST00000199147 382 ntBASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smcr8Q3UMB5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Smcr8Q3UMB5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Smcr8Q3UMB5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smcr8Q3UMB5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.09■□□□□ 0.97
Smcr8Q3UMB5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smcr8Q3UMB5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smcr8Q3UMB5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms