Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cln6Q3U466 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cln6Q3U466 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Cln6Q3U466 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cln6Q3U466 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cln6Q3U466 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cln6Q3U466 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cln6Q3U466 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.77■□□□□ 0.28
Cln6Q3U466 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cln6Q3U466 Gm43566-201ENSMUST00000196851 808 ntBASIC16.77■□□□□ 0.28
Cln6Q3U466 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cln6Q3U466 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cln6Q3U466 Gm5921-201ENSMUST00000075898 882 ntBASIC16.77■□□□□ 0.28
Cln6Q3U466 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cln6Q3U466 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cln6Q3U466 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cln6Q3U466 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cln6Q3U466 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cln6Q3U466 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cln6Q3U466 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cln6Q3U466 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cln6Q3U466 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cln6Q3U466 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cln6Q3U466 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cln6Q3U466 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cln6Q3U466 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.76■□□□□ 0.27
Cln6Q3U466 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.76■□□□□ 0.27
Cln6Q3U466 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.76■□□□□ 0.27
Cln6Q3U466 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cln6Q3U466 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cln6Q3U466 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cln6Q3U466 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cln6Q3U466 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cln6Q3U466 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cln6Q3U466 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cln6Q3U466 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cln6Q3U466 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cln6Q3U466 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cln6Q3U466 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.75■□□□□ 0.27
Cln6Q3U466 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.75■□□□□ 0.27
Cln6Q3U466 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cln6Q3U466 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cln6Q3U466 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cln6Q3U466 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cln6Q3U466 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cln6Q3U466 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.74■□□□□ 0.27
Cln6Q3U466 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.74■□□□□ 0.27
Cln6Q3U466 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.74■□□□□ 0.27
Cln6Q3U466 Gm10232-201ENSMUST00000089221 720 ntBASIC16.74■□□□□ 0.27
Cln6Q3U466 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cln6Q3U466 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cln6Q3U466 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cln6Q3U466 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cln6Q3U466 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cln6Q3U466 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cln6Q3U466 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cln6Q3U466 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cln6Q3U466 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cln6Q3U466 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cln6Q3U466 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cln6Q3U466 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cln6Q3U466 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Cln6Q3U466 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cln6Q3U466 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cln6Q3U466 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Cln6Q3U466 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cln6Q3U466 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cln6Q3U466 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cln6Q3U466 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cln6Q3U466 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.72■□□□□ 0.27
Cln6Q3U466 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cln6Q3U466 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cln6Q3U466 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cln6Q3U466 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cln6Q3U466 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln6Q3U466 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln6Q3U466 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln6Q3U466 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln6Q3U466 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln6Q3U466 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln6Q3U466 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln6Q3U466 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln6Q3U466 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cln6Q3U466 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.71■□□□□ 0.26
Cln6Q3U466 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.7■□□□□ 0.26
Cln6Q3U466 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Gm13238-201ENSMUST00000117655 780 ntBASIC16.7■□□□□ 0.26
Cln6Q3U466 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cln6Q3U466 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.7■□□□□ 0.26
Cln6Q3U466 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.7■□□□□ 0.26
Cln6Q3U466 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms