Protein–RNA interactions for Protein: Q3U1Y4

Dennd4b, DENN domain-containing protein 4B, mousemouse

Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dennd4bQ3U1Y4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Dennd4bQ3U1Y4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
Dennd4bQ3U1Y4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Dennd4bQ3U1Y4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
Dennd4bQ3U1Y4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Dennd4bQ3U1Y4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Dennd4bQ3U1Y4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Dennd4bQ3U1Y4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC29.47■■■□□ 2.31
Dennd4bQ3U1Y4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Dennd4bQ3U1Y4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
Dennd4bQ3U1Y4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Dennd4bQ3U1Y4 Gm20760-201ENSMUST00000179197 648 ntBASIC29.46■■■□□ 2.31
Dennd4bQ3U1Y4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Dennd4bQ3U1Y4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Dennd4bQ3U1Y4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Dennd4bQ3U1Y4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Dennd4bQ3U1Y4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
Dennd4bQ3U1Y4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Dennd4bQ3U1Y4 Mir5133-201ENSMUST00000174955 77 ntBASIC29.44■■■□□ 2.3
Dennd4bQ3U1Y4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Dennd4bQ3U1Y4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC29.44■■■□□ 2.3
Dennd4bQ3U1Y4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Dennd4bQ3U1Y4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Dennd4bQ3U1Y4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC29.43■■■□□ 2.3
Dennd4bQ3U1Y4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Dennd4bQ3U1Y4 Gm22240-201ENSMUST00000175225 82 ntBASIC29.43■■■□□ 2.3
Dennd4bQ3U1Y4 Gm42555-201ENSMUST00000199304 1039 ntBASIC29.43■■■□□ 2.3
Dennd4bQ3U1Y4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Dennd4bQ3U1Y4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Dennd4bQ3U1Y4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Dennd4bQ3U1Y4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
Dennd4bQ3U1Y4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Dennd4bQ3U1Y4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Dennd4bQ3U1Y4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
Dennd4bQ3U1Y4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Dennd4bQ3U1Y4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Dennd4bQ3U1Y4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Dennd4bQ3U1Y4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC29.41■■■□□ 2.3
Dennd4bQ3U1Y4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
Dennd4bQ3U1Y4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Dennd4bQ3U1Y4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Dennd4bQ3U1Y4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
Dennd4bQ3U1Y4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Dennd4bQ3U1Y4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC29.4■■■□□ 2.3
Dennd4bQ3U1Y4 Mir6236-201ENSMUST00000184437 123 ntBASIC29.4■■■□□ 2.3
Dennd4bQ3U1Y4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC29.4■■■□□ 2.3
Dennd4bQ3U1Y4 Gm7514-201ENSMUST00000209475 934 ntBASIC29.4■■■□□ 2.3
Dennd4bQ3U1Y4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
Dennd4bQ3U1Y4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Dennd4bQ3U1Y4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Dennd4bQ3U1Y4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Dennd4bQ3U1Y4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Dennd4bQ3U1Y4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
Dennd4bQ3U1Y4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Dennd4bQ3U1Y4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.29
Dennd4bQ3U1Y4 Gm12527-201ENSMUST00000117967 564 ntBASIC29.38■■■□□ 2.29
Dennd4bQ3U1Y4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Dennd4bQ3U1Y4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
Dennd4bQ3U1Y4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
Dennd4bQ3U1Y4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Dennd4bQ3U1Y4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Dennd4bQ3U1Y4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Dennd4bQ3U1Y4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
Dennd4bQ3U1Y4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
Dennd4bQ3U1Y4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Dennd4bQ3U1Y4 Gm22325-201ENSMUST00000158904 308 ntBASIC29.37■■■□□ 2.29
Dennd4bQ3U1Y4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC29.37■■■□□ 2.29
Dennd4bQ3U1Y4 Gm27801-201ENSMUST00000184174 223 ntBASIC29.37■■■□□ 2.29
Dennd4bQ3U1Y4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Dennd4bQ3U1Y4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC29.37■■■□□ 2.29
Dennd4bQ3U1Y4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Dennd4bQ3U1Y4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Dennd4bQ3U1Y4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Dennd4bQ3U1Y4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
Dennd4bQ3U1Y4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Dennd4bQ3U1Y4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Dennd4bQ3U1Y4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC29.35■■■□□ 2.29
Dennd4bQ3U1Y4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
Dennd4bQ3U1Y4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Dennd4bQ3U1Y4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Dennd4bQ3U1Y4 Snhg20-203ENSMUST00000182811 2153 ntBASIC29.34■■■□□ 2.29
Dennd4bQ3U1Y4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Dennd4bQ3U1Y4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Dennd4bQ3U1Y4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Dennd4bQ3U1Y4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC29.33■■■□□ 2.29
Dennd4bQ3U1Y4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Dennd4bQ3U1Y4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Dennd4bQ3U1Y4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms